RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 TDO2P48775 406 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 PLCD1P51178 756 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 MIGA2Q7L4E1 593 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 NAPBQ9H115 298 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 ZNF112Q9UJU3 913 aa23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 ANGEL1Q9UNK9 670 aaKnown RBP23.15■■□□□ 1.3
PCOLCE-208ENST00000487172 IREB2P48200 963 aaKnown RBP23.14■■□□□ 1.29
PCOLCE-208ENST00000487172 KLRG1Q96E93 195 aa23.14■■□□□ 1.29
PCOLCE-208ENST00000487172 SERPINB13Q9UIV8 391 aa23.14■■□□□ 1.29
PCOLCE-208ENST00000487172 TLL2Q9Y6L7 1015 aa23.14■■□□□ 1.29
PCOLCE-208ENST00000487172 FGAP02671 866 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 HSPA6P17066 643 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 GABPAQ06546 454 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 PRKG1Q13976 671 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 TTLL12Q14166 644 aaPredicted RBP23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 LDLRAD1Q5T700 205 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 SAPCD2Q86UD0 394 aa23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.13■■□□□ 1.29
PCOLCE-208ENST00000487172 CYP2D6P10635 497 aa23.12■■□□□ 1.29
PCOLCE-208ENST00000487172 MOB2Q70IA6 237 aa23.12■■□□□ 1.29
PCOLCE-208ENST00000487172 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
PCOLCE-208ENST00000487172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.12■■□□□ 1.29
PCOLCE-208ENST00000487172 FZD1Q9UP38 647 aa23.12■■□□□ 1.29
PCOLCE-208ENST00000487172 PHF20L1A8MW92 1017 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 MAP3K9P80192 1104 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 SLC4A8Q2Y0W8 1093 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 ANKRD13AQ8IZ07 590 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 HHIPL1Q96JK4 782 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 DNAJC18Q9H819 358 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
PCOLCE-208ENST00000487172 CYP2D7A0A087X1C5 515 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 MINDY4BA8MYZ0 360 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 UBE2Q2LH0YL09 131 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 SLURP2P0DP57 97 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 HUNKP57058 714 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 TATDN1Q6P1N9 297 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 TRIM34Q9BYJ4 488 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 ANAPC4Q9UJX5 808 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 ROBO3Q96MS0 1386 aa23.1■■□□□ 1.29
PCOLCE-208ENST00000487172 LAMB1P07942 1786 aa23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 EVX2Q03828 476 aa23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 PPARAQ07869 468 aa23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 WRNIP1Q96S55 665 aa23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
PCOLCE-208ENST00000487172 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 CTNND1O60716 968 aaKnown RBP23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 PTH1RQ03431 593 aa23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 NOL9Q5SY16 702 aaKnown RBP23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 C16orf86Q6ZW13 317 aa23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 MAP4K1Q92918 833 aa23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 LSG1Q9H089 658 aaKnown RBP23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 CTNNA3Q9UI47 895 aa23.08■■□□□ 1.29
PCOLCE-208ENST00000487172 RASSF10A6NK89 507 aa23.07■■□□□ 1.28
PCOLCE-208ENST00000487172 SMIM22K7EJ46 135 aa23.07■■□□□ 1.28
PCOLCE-208ENST00000487172 SHMT1P34896 483 aa23.07■■□□□ 1.28
PCOLCE-208ENST00000487172 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
PCOLCE-208ENST00000487172 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 INPP5BP32019 993 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 CDK8P49336 464 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 RGMBQ6NW40 437 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 GINM1Q9NU53 330 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 CSADQ9Y600 493 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 U3KPZ7 1027 aaPredicted RBP23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 OTOFQ9HC10 1997 aa23.06■■□□□ 1.28
PCOLCE-208ENST00000487172 CAP2P40123 477 aa23.05■■□□□ 1.28
PCOLCE-208ENST00000487172 VGLL4Q14135 290 aa23.05■■□□□ 1.28
PCOLCE-208ENST00000487172 RRP1BQ14684 758 aaKnown RBP23.05■■□□□ 1.28
PCOLCE-208ENST00000487172 ZNF287Q9HBT7 754 aa23.05■■□□□ 1.28
PCOLCE-208ENST00000487172 ZNF213O14771 459 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 FGRP09769 529 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 DEFB115Q30KQ5 88 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 SCYL3Q8IZE3 742 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 SLC44A5Q8NCS7 719 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 ZKSCAN4Q969J2 545 aaPredicted RBP23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 SLC10A4Q96EP9 437 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 ANO2Q9NQ90 1003 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 SNCAIPQ9Y6H5 919 aa23.04■■□□□ 1.28
PCOLCE-208ENST00000487172 EPB41L2O43491 1005 aaKnown RBP23.03■■□□□ 1.28
PCOLCE-208ENST00000487172 PDE4BQ07343 736 aa23.03■■□□□ 1.28
PCOLCE-208ENST00000487172 IMMTQ16891 758 aaKnown RBP23.03■■□□□ 1.28
PCOLCE-208ENST00000487172 CLMNQ96JQ2 1002 aa23.03■■□□□ 1.28
PCOLCE-208ENST00000487172 CCDC17Q96LX7 622 aa23.03■■□□□ 1.28
PCOLCE-208ENST00000487172 MYH8P13535 1937 aa23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 EIF5BO60841 1220 aaKnown RBP23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 PCP11498 1178 aaKnown RBP23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 CCDC102AQ96A19 550 aa23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 RBM8AQ9Y5S9 174 aaKnown RBP23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 LAMA4Q16363 1823 aa23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 DOCK1Q14185 1865 aa23.02■■□□□ 1.28
PCOLCE-208ENST00000487172 REC8O95072 547 aa23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 ASNSP08243 561 aa23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 ZNF157P51786 506 aaPredicted RBP23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 ERO1BQ86YB8 467 aa23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 ELP3Q9H9T3 547 aa23.01■■□□□ 1.27
PCOLCE-208ENST00000487172 MKNK2Q9HBH9 465 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms