RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 GRIK5Q16478 980 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 CDC42EP5Q6NZY7 148 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 USP50Q70EL3 339 aaPredicted RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 ZNF589Q86UQ0 364 aaPredicted RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 APOBEC3FQ8IUX4 373 aaKnown RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 MAPKAPK5Q8IW41 473 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 SULF1Q8IWU6 871 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 IFNL3Q8IZI9 196 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 SDR42E1Q8WUS8 393 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 MAP4K1Q92918 833 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 GMLQ99445 158 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 RIOK1Q9BRS2 568 aaKnown RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 MKNK2Q9HBH9 465 aa8.25□□□□□ -1.09
UBR4-214ENST00000486515 RBM8AQ9Y5S9 174 aaKnown RBP8.25□□□□□ -1.09
UBR4-214ENST00000486515 CLRN2A0PK11 232 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 TCP10L2B9ZVM9 353 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 WNT10BO00744 389 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 ENTPD3O75355 529 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 PCP11498 1178 aaKnown RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 EPS15P42566 896 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 TCP10Q12799 353 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 ALX1Q15699 326 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 APOBEC3HQ6NTF7 200 aaKnown RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 FBXO46Q6PJ61 603 aaPredicted RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 MFSD6Q6ZSS7 791 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 ADGRA1Q86SQ6 560 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 PRMT6Q96LA8 375 aaPredicted RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 KRT23Q9C075 422 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 CNNM2Q9H8M5 875 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 ZNF70Q9UC06 446 aaPredicted RBP8.24□□□□□ -1.09
UBR4-214ENST00000486515 SCN4AP35499 1836 aa8.24□□□□□ -1.09
UBR4-214ENST00000486515 FER1L6Q2WGJ9 1857 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 ERICH2A1L162 156 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 GSG1L2A8MUP6 293 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 USP17L21D6R901 530 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 PRKAB2O43741 272 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 CELF2O95319 508 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 FGAP02671 866 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 CHGBP05060 677 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 NT5C2P49902 561 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 ANAPC15P60006 121 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 PTH1RQ03431 593 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 NBPF9Q3BBW0 867 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 SUPT20HL1Q3ZLR7 823 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 ANGEL2Q5VTE6 544 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 FKBP1CQ5VVH2 108 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 FAM83AQ86UY5 434 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 ZNF444Q8N0Y2 327 aaPredicted RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 ZC3H15Q8WU90 426 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 IDI2Q9BXS1 227 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 USP26Q9BXU7 913 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 LSG1Q9H089 658 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 OSBPL5Q9H0X9 879 aaPredicted RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 DCP1AQ9NPI6 582 aaPredicted RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 SAP30BPQ9UHR5 308 aaKnown RBP8.23□□□□□ -1.09
UBR4-214ENST00000486515 TAOK2Q9UL54 1235 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 PPP2R3BQ9Y5P8 575 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 CCDC88AQ3V6T2 1871 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 ZMYM6O95789 1325 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 FLT1P17948 1338 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 MYH7P12883 1935 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 AKAP11Q9UKA4 1901 aa8.23□□□□□ -1.09
UBR4-214ENST00000486515 MAST2Q6P0Q8 1798 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 DOCK2Q92608 1830 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 LAMA3Q16787 3333 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 COL4A5P29400 1685 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 SLC27A2O14975 620 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 ST18O60284 1047 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 HSPA4P34932 840 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
UBR4-214ENST00000486515 CACNB3P54284 484 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 RHBDL3P58872 404 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 HAND2P61296 217 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 PPARAQ07869 468 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 RRP12Q5JTH9 1297 aaKnown RBP8.22□□□□□ -1.09
UBR4-214ENST00000486515 PPP4R3BQ5MIZ7 849 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 VPS53Q5VIR6 699 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 CREB3L3Q68CJ9 461 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 CTR9Q6PD62 1173 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 FOXP4Q8IVH2 680 aaPredicted RBP8.22□□□□□ -1.09
UBR4-214ENST00000486515 NCOA7Q8NI08 942 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 ZNF384Q8TF68 577 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 FAM151AQ8WW52 585 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 ESR2Q92731 530 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 LRCH3Q96II8 777 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 CSRNP1Q96S65 589 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 GGA3Q9NZ52 723 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 PI4KBQ9UBF8 816 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 SWAP70Q9UH65 585 aa8.22□□□□□ -1.09
UBR4-214ENST00000486515 SERPINB13Q9UIV8 391 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms