RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 PPFIA1Q13136 1202 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 LMBR1LQ6UX01 489 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 RUFY4Q6ZNE9 571 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 VSIG1Q86XK7 387 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 LEO1Q8WVC0 666 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PSMB7Q99436 277 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MAGEB6P1A0A0J9YX57 407 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SLC27A2O14975 620 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TFCP2Q12800 502 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 AKNAD1Q5T1N1 836 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SETDB2Q96T68 719 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ACTN4O43707 911 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ASIC2Q16515 512 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TAOK1Q7L7X3 1001 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 RRP36Q96EU6 259 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MAPK8IP1Q9UQF2 711 aa10.68□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PLEKHG1Q9ULL1 1385 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CASQ2O14958 399 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ERCC5P28715 1186 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 OTUD7AQ8TE49 926 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 STK38LQ9Y2H1 464 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ARHGEF10O15013 1369 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 GNGT1P63211 74 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PAK2Q13177 524 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MYCBPQ99417 103 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 METP08581 1390 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 GCKP35557 465 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TNNI2P48788 182 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PPM1FP49593 454 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 DMTNQ08495 405 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ZKSCAN3Q9BRR0 538 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TACO1Q9BSH4 297 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PPANQ9NQ55 473 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CDC37L1Q7L3B6 337 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 RNF10Q8N5U6 811 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.72e-7■■■□□ 15.6
CDK5RAP2-216ENST00000483412 IMPG2Q9BZV3 1241 aa10.67□□□□□ -0.7
CDK5RAP2-216ENST00000483412 POLR2DO15514 142 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SPOPO43791 374 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 HSPA1LP34931 641 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PDE4DQ08499 809 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ERCC6LQ2NKX8 1250 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CCDC38Q502W7 563 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SMARCC2Q8TAQ2 1214 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TRAF5O00463 557 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 NAA16Q6N069 864 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CCDC62Q6P9F0 684 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PLEKHA4Q9H4M7 779 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PAK1Q13153 545 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 SOS1Q07889 1333 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TXNDC9O14530 226 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 DTNBO60941 627 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ZNF202O95125 648 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 BEND3Q5T5X7 828 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TAB2Q9NYJ8 693 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ZNF853P0CG23 659 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 BRD3Q15059 726 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CLUL1Q15846 466 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 HS2ST1Q7LGA3 356 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 FMNL3Q8IVF7 1028 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ERVK-7P63135 1459 aa10.66□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TNFAIP3P21580 790 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 INF2Q27J81 1249 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CWF19L2Q2TBE0 894 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 VWA3BQ502W6 1294 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CDC42BPAQ5VT25 1732 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 VPS52Q8N1B4 723 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MIGA1Q8NAN2 632 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MAK16Q9BXY0 300 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PLCB1Q9NQ66 1216 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 PDE1CQ14123 709 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 LINS1Q8NG48 757 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 FAM212AQ96EL1 285 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 NCOA5Q9HCD5 579 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 RIPOR2Q9Y4F9 1068 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CEP104O60308 925 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 EPB41P11171 864 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 KRT5P13647 590 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 GNAT2P19087 354 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 TRIM68Q6AZZ1 485 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 XPO4Q9C0E2 1151 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 CCDC65Q8IXS2 484 aa10.65□□□□□ -0.7
CDK5RAP2-216ENST00000483412 MGARPQ8TDB4 240 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms