RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CSF1RP07333 972 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 PHKA2P46019 1235 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 SMTNP53814 917 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 CASP7P55210 303 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 GRAPQ13588 217 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 MTFR1Q15390 333 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 CCDC152Q4G0S7 254 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 BEND3Q5T5X7 828 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 RIPOR1Q6ZS17 1223 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 TRIM50Q86XT4 487 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 SUPT20HQ8NEM7 779 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 GRAPLQ8TC17 118 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-213ENST00000480102 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
PTCD3-213ENST00000480102 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
PTCD3-213ENST00000480102 TMX4Q9H1E5 349 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-213ENST00000480102 PHAXQ9H814 394 aaKnown RBP6.21□□□□□ -1.42
PTCD3-213ENST00000480102 STK17AQ9UEE5 414 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 SERTAD1Q9UHV2 236 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 HDAC5Q9UQL6 1122 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 ZNF609O15014 1411 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 ZBED9Q6R2W3 1325 aa6.21□□□□□ -1.42
PTCD3-213ENST00000480102 GLTPD2A6NH11 291 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 FZD9O00144 591 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ELL2O00472 640 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-213ENST00000480102 IRS4O14654 1257 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-213ENST00000480102 BACH1O14867 736 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 PDE8AO60658 829 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 F11P03951 625 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ANXA1P04083 346 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 GPTP24298 496 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ATP1A2P50993 1020 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 CLDN10P78369 228 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 AIMP1Q12904 312 aaKnown RBP6.2□□□□□ -1.42
PTCD3-213ENST00000480102 GCKRQ14397 625 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 DBN1Q16643 649 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 C9orf131Q5VYM1 1079 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ARHGAP27Q6ZUM4 889 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.427e-20■□□□□ 8.5
PTCD3-213ENST00000480102 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 KIAA1024Q9UPX6 916 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 DLG5Q8TDM6 1919 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 ABCC4O15439 1325 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 KIF16BQ96L93 1317 aa6.2□□□□□ -1.42
PTCD3-213ENST00000480102 A6NJY4 79 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 C21orf2O43822 256 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 TOMM70O94826 608 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 KIAA2012Q0VF49 1180 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 FSTL1Q12841 308 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 FKBP5Q13451 457 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 C15orf52Q6ZUT6 534 aaKnown RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 TTLL11Q8NHH1 800 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 CDC5LQ99459 802 aaKnown RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 C1orf115Q9H7X2 142 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 ZNF358Q9NW07 568 aa6.19□□□□□ -1.42
PTCD3-213ENST00000480102 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 IQSEC3Q9UPP2 1182 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 MAFBQ9Y5Q3 323 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-213ENST00000480102 IQCA1LA6NCM1 817 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 GRM8O00222 908 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 CDK2AP1O14519 115 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 THBS1P07996 1170 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 IARSP41252 1262 aaKnown RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 PLA2G4AP47712 749 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 RARSP54136 660 aaKnown RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 CTSWP56202 376 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 GAS6Q14393 721 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 RABL6Q3YEC7 729 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 ZNF295-AS1Q8N0V1 137 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 GPC2Q8N158 579 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 OGFOD1Q8N543 542 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 SSH1Q8WYL5 1049 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 MYD88Q99836 296 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 NIFKQ9BYG3 293 aaKnown RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 PPP1R12CQ9BZL4 782 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 API5Q9BZZ5 524 aaKnown RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 SRCIN1Q9C0H9 1055 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 NUCKS1Q9H1E3 243 aaKnown RBP6.18□□□□□ -1.42
PTCD3-213ENST00000480102 GPAMQ9HCL2 828 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 DLEC1Q9Y238 1755 aa6.18□□□□□ -1.42
PTCD3-213ENST00000480102 BRCA1P38398 1863 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 FAM181BA6NEQ2 426 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 ZBTB7BO15156 539 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 IPO8O15397 1037 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 HCLS1P14317 486 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 VEGFAP15692 232 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 RPS12P25398 132 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 MSX1P28360 303 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 CCT4P50991 539 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 PRELPP51888 382 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 EPHA4P54764 986 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms