RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 LRRFIP1Q32MZ4 808 aaKnown RBP28.9■■■□□ 2.22
ARF1-208ENST00000478336 ERO1BQ86YB8 467 aa28.9■■■□□ 2.22
ARF1-208ENST00000478336 BEGAINQ9BUH8 593 aa28.9■■■□□ 2.22
ARF1-208ENST00000478336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.9■■■□□ 2.22
ARF1-208ENST00000478336 MANSC4A6NHS7 340 aaPredicted RBP28.89■■■□□ 2.22
ARF1-208ENST00000478336 TM4SF4P48230 202 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 SDR42E1Q8WUS8 393 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 OSBP2Q969R2 916 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 EVI5LQ96CN4 794 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 OTUD5Q96G74 571 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 DNAJC18Q9H819 358 aa28.89■■■□□ 2.22
ARF1-208ENST00000478336 CA12O43570 354 aa28.88■■■□□ 2.21
ARF1-208ENST00000478336 HLA-DOAP06340 250 aa28.88■■■□□ 2.21
ARF1-208ENST00000478336 SREBF2Q12772 1141 aa28.88■■■□□ 2.21
ARF1-208ENST00000478336 FOXP4Q8IVH2 680 aaPredicted RBP28.88■■■□□ 2.21
ARF1-208ENST00000478336 SCYL3Q8IZE3 742 aa28.88■■■□□ 2.21
ARF1-208ENST00000478336 DCP1AQ9NPI6 582 aaPredicted RBP28.88■■■□□ 2.21
ARF1-208ENST00000478336 PRKAB2O43741 272 aa28.87■■■□□ 2.21
ARF1-208ENST00000478336 CTNND1O60716 968 aaKnown RBP28.87■■■□□ 2.21
ARF1-208ENST00000478336 PDE4AP27815 886 aa28.87■■■□□ 2.21
ARF1-208ENST00000478336 PPATQ06203 517 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 PPIL2Q13356 520 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 SLC4A8Q2Y0W8 1093 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 STRBPQ96SI9 672 aaKnown RBP28.86■■■□□ 2.21
ARF1-208ENST00000478336 EHD4Q9H223 541 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 ATP8A2Q9NTI2 1148 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 SAGE1Q9NXZ1 904 aa28.86■■■□□ 2.21
ARF1-208ENST00000478336 CENPBP07199 599 aaPredicted RBP28.85■■■□□ 2.21
ARF1-208ENST00000478336 CTCFP49711 727 aaPredicted RBP28.85■■■□□ 2.21
ARF1-208ENST00000478336 TTC6Q86TZ1 520 aa28.85■■■□□ 2.21
ARF1-208ENST00000478336 MS4A4AQ96JQ5 239 aa28.85■■■□□ 2.21
ARF1-208ENST00000478336 RNF186Q9NXI6 227 aa28.85■■■□□ 2.21
ARF1-208ENST00000478336 ATAD5Q96QE3 1844 aa28.85■■■□□ 2.21
ARF1-208ENST00000478336 BAZ2AQ9UIF9 1905 aaKnown RBP28.84■■■□□ 2.21
ARF1-208ENST00000478336 HSPA8P11142 646 aaKnown RBP28.84■■■□□ 2.21
ARF1-208ENST00000478336 INHBEP58166 350 aa28.84■■■□□ 2.21
ARF1-208ENST00000478336 RRP1BQ14684 758 aaKnown RBP28.84■■■□□ 2.21
ARF1-208ENST00000478336 ZMYM1Q5SVZ6 1142 aa28.84■■■□□ 2.21
ARF1-208ENST00000478336 MCM9Q9NXL9 1143 aa28.84■■■□□ 2.21
ARF1-208ENST00000478336 SLC4A4Q9Y6R1 1079 aa28.84■■■□□ 2.21
ARF1-208ENST00000478336 TESPA1A2RU30 521 aaPredicted RBP28.83■■■□□ 2.21
ARF1-208ENST00000478336 M0R2C6 588 aa28.83■■■□□ 2.21
ARF1-208ENST00000478336 IRF6O14896 467 aa28.83■■■□□ 2.21
ARF1-208ENST00000478336 CRACR2BQ8N4Y2 399 aaPredicted RBP28.83■■■□□ 2.21
ARF1-208ENST00000478336 PICK1Q9NRD5 415 aa28.83■■■□□ 2.21
ARF1-208ENST00000478336 PHIPQ8WWQ0 1821 aa28.83■■■□□ 2.21
ARF1-208ENST00000478336 GPAA1O43292 621 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 PTPRAP18433 802 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 CAP2P40123 477 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 PLCD1P51178 756 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 GTF2A2P52657 109 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 TICAM2Q86XR7 235 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 TRIM34Q9BYJ4 488 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 SERPINB13Q9UIV8 391 aa28.82■■■□□ 2.2
ARF1-208ENST00000478336 POLR3DP05423 398 aaPredicted RBP28.81■■■□□ 2.2
ARF1-208ENST00000478336 SEC62Q99442 399 aaKnown RBP28.81■■■□□ 2.2
ARF1-208ENST00000478336 TSKSQ9UJT2 592 aa28.81■■■□□ 2.2
ARF1-208ENST00000478336 KCNH4Q9UQ05 1017 aa28.81■■■□□ 2.2
ARF1-208ENST00000478336 IGF2BP3O00425 579 aaKnown RBP eCLIP28.8■■■□□ 2.21e-10■■□□□ 12.3
ARF1-208ENST00000478336 TRPA1O75762 1119 aa28.8■■■□□ 2.2
ARF1-208ENST00000478336 EVX2Q03828 476 aa28.8■■■□□ 2.2
ARF1-208ENST00000478336 IFNL1Q8IU54 200 aa28.8■■■□□ 2.2
ARF1-208ENST00000478336 BRI3BPQ8WY22 251 aa28.8■■■□□ 2.2
ARF1-208ENST00000478336 CCL15-CCL14A0A0B4J2E2 113 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 TRIM6-TRIM34B2RNG4 842 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 CYP2D6P10635 497 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 GABPAQ06546 454 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 SNAPC2Q13487 334 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 CCL15Q16663 113 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 PTPN18Q99952 460 aa28.79■■■□□ 2.2
ARF1-208ENST00000478336 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.79■■■□□ 2.2
ARF1-208ENST00000478336 GSG1L2A8MUP6 293 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 NEFLP07196 543 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 LBX1P52954 281 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 TATDN1Q6P1N9 297 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 CENPQQ7L2Z9 268 aaPredicted RBP28.78■■■□□ 2.2
ARF1-208ENST00000478336 DDRGK1Q96HY6 314 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 ZHX2Q9Y6X8 837 aa28.78■■■□□ 2.2
ARF1-208ENST00000478336 PTPRFP10586 1907 aa28.77■■■□□ 2.2
ARF1-208ENST00000478336 CETPP11597 493 aa28.77■■■□□ 2.2
ARF1-208ENST00000478336 GNAT2P19087 354 aa28.77■■■□□ 2.2
ARF1-208ENST00000478336 GIMAP6Q6P9H5 292 aa28.77■■■□□ 2.2
ARF1-208ENST00000478336 RILPL2Q969X0 211 aa28.77■■■□□ 2.2
ARF1-208ENST00000478336 ALDH1A1P00352 501 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 SHMT1P34896 483 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 JAG1P78504 1218 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 C12orf60Q5U649 245 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 CCDC84Q86UT8 332 aaPredicted RBP28.76■■■□□ 2.19
ARF1-208ENST00000478336 CFHR5Q9BXR6 569 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 PRDM10Q9NQV6 1147 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 TAOK2Q9UL54 1235 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 AFG3L2Q9Y4W6 797 aa28.76■■■□□ 2.19
ARF1-208ENST00000478336 USP17L12C9JPN9 530 aa28.75■■■□□ 2.19
ARF1-208ENST00000478336 USP17L21D6R901 530 aa28.75■■■□□ 2.19
ARF1-208ENST00000478336 CXCL11O14625 94 aa28.75■■■□□ 2.19
ARF1-208ENST00000478336 EPB41L4AQ9HCS5 686 aaPredicted RBP28.75■■■□□ 2.19
ARF1-208ENST00000478336 GINM1Q9NU53 330 aa28.75■■■□□ 2.19
ARF1-208ENST00000478336 ARPP21Q9UBL0 812 aaPredicted RBP28.75■■■□□ 2.19
ARF1-208ENST00000478336 CYP2D7A0A087X1C5 515 aa28.74■■■□□ 2.19
ARF1-208ENST00000478336 GDF11O95390 407 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms