RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 MCM9Q9NXL9 1143 aa26.9■■□□□ 1.9
CCDC7-206ENST00000476558 USP17L8P0C7I0 530 aa26.89■■□□□ 1.9
CCDC7-206ENST00000476558 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.9
CCDC7-206ENST00000476558 SYAP1Q96A49 352 aaPredicted RBP26.89■■□□□ 1.9
CCDC7-206ENST00000476558 SUGT1Q9Y2Z0 365 aa26.89■■□□□ 1.9
CCDC7-206ENST00000476558 ROBO3Q96MS0 1386 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 SLX4Q8IY92 1834 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 RANBP6O60518 1105 aaKnown RBP26.88■■□□□ 1.89
CCDC7-206ENST00000476558 PRDM1O75626 825 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 SLC3A2P08195 630 aaKnown RBP26.88■■□□□ 1.89
CCDC7-206ENST00000476558 GTF2IP78347 998 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 ATL3Q6DD88 541 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 CCDC144CPQ8IYA2 1237 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 ZNF654Q8IZM8 581 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 NOL10Q9BSC4 688 aaKnown RBP26.88■■□□□ 1.89
CCDC7-206ENST00000476558 NAV1Q8NEY1 1877 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 ECM29Q5VYK3 1845 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 STK36Q9NRP7 1315 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 IFNAR1P17181 557 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 USP5P45974 858 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 GUCY1B3Q02153 619 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 SLF2Q8IX21 1173 aa26.88■■□□□ 1.89
CCDC7-206ENST00000476558 BTDP43251 543 aa26.87■■□□□ 1.89
CCDC7-206ENST00000476558 NT5C2P49902 561 aa26.87■■□□□ 1.89
CCDC7-206ENST00000476558 SPATA32Q96LK8 384 aa26.87■■□□□ 1.89
CCDC7-206ENST00000476558 TMX4Q9H1E5 349 aaPredicted RBP26.87■■□□□ 1.89
CCDC7-206ENST00000476558 CFAP45Q9UL16 551 aa26.87■■□□□ 1.89
CCDC7-206ENST00000476558 OTUD7BQ6GQQ9 843 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 IQCA1Q86XH1 822 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 TGFBRAP1Q8WUH2 860 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 PHKBQ93100 1093 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 DDX60LQ5H9U9 1706 aaKnown RBP26.86■■□□□ 1.89
CCDC7-206ENST00000476558 IARSP41252 1262 aaKnown RBP26.86■■□□□ 1.89
CCDC7-206ENST00000476558 RHBDL3P58872 404 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 PDE4BQ07343 736 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 FANCBQ8NB91 859 aa26.86■■□□□ 1.89
CCDC7-206ENST00000476558 FMNL1O95466 1100 aaPredicted RBP26.85■■□□□ 1.89
CCDC7-206ENST00000476558 PLCG2P16885 1265 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 PPP2R5BQ15173 497 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 RTN1Q16799 776 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 LRSAM1Q6UWE0 723 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 CERS5Q8N5B7 392 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 C7orf43Q8WVR3 580 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 EYA3Q99504 573 aa26.85■■□□□ 1.89
CCDC7-206ENST00000476558 BAG6P46379 1132 aa26.84■■□□□ 1.89
CCDC7-206ENST00000476558 ALG1Q9BT22 464 aa26.84■■□□□ 1.89
CCDC7-206ENST00000476558 GJB4Q9NTQ9 266 aa26.84■■□□□ 1.89
CCDC7-206ENST00000476558 RCOR1Q9UKL0 485 aa26.84■■□□□ 1.89
CCDC7-206ENST00000476558 CCDC196A0A1B0GTZ2 297 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 SYCE3A1L190 88 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 CHRNA5P30532 468 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 NBPF11Q86T75 865 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 CNKSR1Q969H4 720 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 AIFM3Q96NN9 605 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 FOCADQ5VW36 1801 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 DOK7Q18PE1 504 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 CCDC183Q5T5S1 534 aa26.83■■□□□ 1.89
CCDC7-206ENST00000476558 PDGFDQ9GZP0 370 aaPredicted RBP26.83■■□□□ 1.89
CCDC7-206ENST00000476558 SNED1Q8TER0 1413 aa26.82■■□□□ 1.88
CCDC7-206ENST00000476558 SSRP1Q08945 709 aaKnown RBP26.82■■□□□ 1.88
CCDC7-206ENST00000476558 IFIT1BQ5T764 474 aaKnown RBP26.82■■□□□ 1.88
CCDC7-206ENST00000476558 PGBD1Q96JS3 809 aa26.82■■□□□ 1.88
CCDC7-206ENST00000476558 ZNF396Q96N95 335 aaPredicted RBP26.82■■□□□ 1.88
CCDC7-206ENST00000476558 DAGLAQ9Y4D2 1042 aa26.82■■□□□ 1.88
CCDC7-206ENST00000476558 KIF23Q02241 960 aaPredicted RBP26.81■■□□□ 1.88
CCDC7-206ENST00000476558 TROAPQ12815 778 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 BRAPQ7Z569 592 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 DEFB132Q7Z7B7 95 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 CRACR2BQ8N4Y2 399 aaPredicted RBP26.81■■□□□ 1.88
CCDC7-206ENST00000476558 FAM47AQ5JRC9 791 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 PODNQ7Z5L7 613 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 MAPKAPK5Q8IW41 473 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 TEX11Q8IYF3 940 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 KLHL34Q8N239 644 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 USP28Q96RU2 1077 aa26.81■■□□□ 1.88
CCDC7-206ENST00000476558 SF3B2Q13435 895 aaKnown RBP26.8■■□□□ 1.88
CCDC7-206ENST00000476558 KRT40Q6A162 431 aa26.8■■□□□ 1.88
CCDC7-206ENST00000476558 SLC26A6Q9BXS9 759 aa26.8■■□□□ 1.88
CCDC7-206ENST00000476558 PLCD1P51178 756 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 AMOTL1Q8IY63 956 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 DYNLL2Q96FJ2 89 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 FLT1P17948 1338 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 KIF28PB7ZC32 967 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 NMT2O60551 498 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 DDAH1O94760 285 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 RCSD1Q6JBY9 416 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 CATIPQ7Z7H3 387 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 NUP133Q8WUM0 1156 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 C10orf71Q711Q0 1435 aa26.79■■□□□ 1.88
CCDC7-206ENST00000476558 ZNF646O15015 1829 aaPredicted RBP26.78■■□□□ 1.88
CCDC7-206ENST00000476558 UBE2Q2LH0YL09 131 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 CALM1P0DP23 149 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 CALM2P0DP24 149 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 CALM3P0DP25 149 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 FUT2Q10981 343 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 WASF1Q92558 559 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 ANKS1AQ92625 1134 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 PANK2Q9BZ23 570 aa26.78■■□□□ 1.88
CCDC7-206ENST00000476558 FTOQ9C0B1 505 aaKnown RBP eCLIP26.78■■□□□ 1.88
CCDC7-206ENST00000476558 RTEL1Q9NZ71 1219 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms