RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ADM5C9JUS6 153 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 SLC3A2P08195 630 aaKnown RBP14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 KRT26Q7Z3Y9 468 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 LDHDQ86WU2 507 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 TBC1D10CQ8IV04 446 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 KCNB2Q92953 911 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 TEPSINQ96N21 525 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 TBC1D32Q96NH3 1257 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 EHD4Q9H223 541 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 PI4KBQ9UBF8 816 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
TRAPPC12-217ENST00000473348 RBM25P49756 843 aaKnown RBP14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 AKNAD1Q5T1N1 836 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 STOX1Q6ZVD7 989 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 DYNLL2Q96FJ2 89 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 SERPINB13Q9UIV8 391 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 PHIPQ8WWQ0 1821 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 NEDD4P46934 1319 aa14.89□□□□□ -0.03
TRAPPC12-217ENST00000473348 FAM196BA6NMK8 535 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 E7EWF7 191 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 YY1P25490 414 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 ANAPC15P60006 121 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 KRT32Q14532 448 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 MAP1SQ66K74 1059 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 MFSD6Q6ZSS7 791 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 SLC44A5Q8NCS7 719 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 GLIS2Q9BZE0 524 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 RNF41Q9H4P4 317 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC12-217ENST00000473348 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 GABPAQ06546 454 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 PDE4BQ07343 736 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 TSGA10IPQ3SY00 556 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 NBPF12Q5TAG4 269 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 CDC37L1Q7L3B6 337 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 METTL16Q86W50 562 aaKnown RBP14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 CDCA5Q96FF9 252 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 DNAJC18Q9H819 358 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 TOMM22Q9NS69 142 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 SWAP70Q9UH65 585 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
TRAPPC12-217ENST00000473348 PRDM1O75626 825 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 SHMT1P34896 483 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 CDK8P49336 464 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 ADCK5Q3MIX3 580 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 RRP12Q5JTH9 1297 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 RALYLQ86SE5 291 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 HOOK2Q96ED9 719 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 PTPRFP10586 1907 aa14.86□□□□□ -0.03
TRAPPC12-217ENST00000473348 B4E1Z4 1266 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 KIF3CO14782 793 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 ORC4O43929 436 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 FGRP09769 529 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 TRDNQ13061 729 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 SUPT20HL1Q3ZLR7 823 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 MIGA2Q7L4E1 593 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 NCOA7Q8NI08 942 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 KRT23Q9C075 422 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.032e-6■■■■■ 28.1
TRAPPC12-217ENST00000473348 MKNK2Q9HBH9 465 aa14.85□□□□□ -0.03
TRAPPC12-217ENST00000473348 TBC1D12O60347 775 aa14.84□□□□□ -0.03
TRAPPC12-217ENST00000473348 RASA1P20936 1047 aa14.84□□□□□ -0.03
TRAPPC12-217ENST00000473348 NEK1Q96PY6 1258 aa14.84□□□□□ -0.03
TRAPPC12-217ENST00000473348 TRAF5O00463 557 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 KDM4AO75164 1064 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 PSMA5P28066 241 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 NF2P35240 595 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 MAP3K10Q02779 954 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 COL9A3Q14050 684 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 TATDN1Q6P1N9 297 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 MB21D2Q8IYB1 491 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 ZNF784Q8NCA9 323 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 NKX2-3Q8TAU0 364 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 ESR2Q92731 530 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 KIF2CQ99661 725 aa14.83□□□□□ -0.04
TRAPPC12-217ENST00000473348 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms