RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 SERPINB13Q9UIV8 391 aa19.1■□□□□ 0.65
PCOLCE-205ENST00000472348 RBM8AQ9Y5S9 174 aaKnown RBP19.1■□□□□ 0.65
PCOLCE-205ENST00000472348 DDTLA6NHG4 134 aaPredicted RBP19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 MCCP23508 829 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 PPARAQ07869 468 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 SH3BP5LQ7L8J4 393 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 CSRNP1Q96S65 589 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 UPF2Q9HAU5 1272 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 GINM1Q9NU53 330 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 PALD1Q9ULE6 856 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 CLEC11AQ9Y240 323 aa19.09■□□□□ 0.65
PCOLCE-205ENST00000472348 NF2P35240 595 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 FKBP1BP68106 108 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 TCP10Q12799 353 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 KRT32Q14532 448 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 C16orf86Q6ZW13 317 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 TMEM39BQ9GZU3 492 aa19.08■□□□□ 0.64
PCOLCE-205ENST00000472348 ORC4O43929 436 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 CYP21A2P08686 494 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 PDE4BQ07343 736 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 MAP3K11Q16584 847 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 TATDN1Q6P1N9 297 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 ZSCAN29Q8IWY8 852 aaPredicted RBP19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 ZFPM1Q8IX07 1006 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 STAG1Q8WVM7 1258 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
PCOLCE-205ENST00000472348 PAPPA2Q9BXP8 1791 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 ITGBL1O95965 494 aaPredicted RBP19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 RBM25P49756 843 aaKnown RBP19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 PLCD1P51178 756 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 HTRA3P83110 453 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 AKNAD1Q5T1N1 836 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 CCDC17Q96LX7 622 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 MTA3Q9BTC8 594 aa19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
PCOLCE-205ENST00000472348 CREB3L3Q68CJ9 461 aa19.05■□□□□ 0.64
PCOLCE-205ENST00000472348 ZNF112Q9UJU3 913 aa19.05■□□□□ 0.64
PCOLCE-205ENST00000472348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCOLCE-205ENST00000472348 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 SLC27A2O14975 620 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 PPP1R12BO60237 982 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 SEC24BO95487 1268 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 APLP1P51693 650 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 NBPF12Q5TAG4 269 aaPredicted RBP19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 MFSD6Q6ZSS7 791 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 USP48Q86UV5 1035 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 CDCA5Q96FF9 252 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 ZNF341Q9BYN7 854 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 KRT23Q9C075 422 aa19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 SAP30BPQ9UHR5 308 aaKnown RBP19.04■□□□□ 0.64
PCOLCE-205ENST00000472348 PASKQ96RG2 1323 aa19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 SSC5DA1L4H1 1573 aa19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 HMGB1P09429 215 aaKnown RBP19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 MAP1SQ66K74 1059 aaPredicted RBP19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 CRACR2BQ8N4Y2 399 aaPredicted RBP19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 GLIS2Q9BZE0 524 aaPredicted RBP19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 TM6SF1Q9BZW5 370 aa19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 PLIN4Q96Q06 1357 aa19.03■□□□□ 0.64
PCOLCE-205ENST00000472348 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 ADM5C9JUS6 153 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 CDK8P49336 464 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 TRDNQ13061 729 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 PPP4R3BQ5MIZ7 849 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 TRIM34Q9BYJ4 488 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 NBPF3Q9H094 633 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 DNAJC18Q9H819 358 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 DOCK1Q14185 1865 aa19.02■□□□□ 0.64
PCOLCE-205ENST00000472348 WDR19Q8NEZ3 1342 aa19.01■□□□□ 0.63
PCOLCE-205ENST00000472348 CTNND1O60716 968 aaKnown RBP19.01■□□□□ 0.63
PCOLCE-205ENST00000472348 NCOA7Q8NI08 942 aa19.01■□□□□ 0.63
PCOLCE-205ENST00000472348 KLRG1Q96E93 195 aa19.01■□□□□ 0.63
PCOLCE-205ENST00000472348 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
PCOLCE-205ENST00000472348 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 PHF20L1A8MW92 1017 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 E7EWF7 191 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 CYP2D6P10635 497 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 PSMA5P28066 241 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 SHMT1P34896 483 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 CCDC178Q5BJE1 867 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 NOL9Q5SY16 702 aaKnown RBP19■□□□□ 0.63
PCOLCE-205ENST00000472348 ESR2Q92731 530 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 C22orf23Q9BZE7 217 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 MKNK2Q9HBH9 465 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 TCP11L1Q9NUJ3 509 aa19■□□□□ 0.63
PCOLCE-205ENST00000472348 OTOFQ9HC10 1997 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 USP2O75604 605 aaPredicted RBP18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 RASA1P20936 1047 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 IREB2P48200 963 aaKnown RBP18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 ARMC9Q7Z3E5 817 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 TBC1D10CQ8IV04 446 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 ZNF444Q8N0Y2 327 aaPredicted RBP18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 FBXL16Q8N461 479 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 TBC1D32Q96NH3 1257 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 SYNPO2Q9UMS6 1093 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
PCOLCE-205ENST00000472348 ASNSP08243 561 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms