RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-209ENST00000472116 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-209ENST00000472116 MSCO60682 206 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.33
CDHR3-209ENST00000472116 CASP7P55210 303 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 LHX8Q68G74 356 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 BADQ92934 168 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
CDHR3-209ENST00000472116 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
CDHR3-209ENST00000472116 IFT57Q9NWB7 429 aa12.96□□□□□ -0.33
CDHR3-209ENST00000472116 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
CDHR3-209ENST00000472116 RGS2P41220 211 aa12.95□□□□□ -0.34
CDHR3-209ENST00000472116 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
CDHR3-209ENST00000472116 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
CDHR3-209ENST00000472116 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
CDHR3-209ENST00000472116 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 DNM1LO00429 736 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 DNAJB2P25686 324 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 CNGA1P29973 690 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CDHR3-209ENST00000472116 AKNAD1Q5T1N1 836 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 LMBR1LQ6UX01 489 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 ALYREFQ86V81 257 aaKnown RBP12.94□□□□□ -0.34
CDHR3-209ENST00000472116 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
CDHR3-209ENST00000472116 MROH5Q6ZUA9 1318 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
CDHR3-209ENST00000472116 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
CDHR3-209ENST00000472116 MAPK4P31152 587 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 FOXO4P98177 505 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 NFIAQ12857 509 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDHR3-209ENST00000472116 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 MFSD14CQ5VZR4 134 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 LPAR1Q92633 364 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 APBA2Q99767 749 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 ASCC2Q9H1I8 757 aaPredicted RBP12.93□□□□□ -0.34
CDHR3-209ENST00000472116 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 MORF4L1Q9UBU8 362 aa12.93□□□□□ -0.34
CDHR3-209ENST00000472116 KBTBD13C9JR72 458 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 ZNF853P0CG23 659 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
CDHR3-209ENST00000472116 AAK1Q2M2I8 961 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 GPRC5AQ8NFJ5 357 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
CDHR3-209ENST00000472116 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
CDHR3-209ENST00000472116 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
CDHR3-209ENST00000472116 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
CDHR3-209ENST00000472116 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDHR3-209ENST00000472116 SPP2Q13103 211 aa12.91□□□□□ -0.34
CDHR3-209ENST00000472116 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
CDHR3-209ENST00000472116 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
CDHR3-209ENST00000472116 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
CDHR3-209ENST00000472116 ENTPD3O75355 529 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
CDHR3-209ENST00000472116 IGFBP4P22692 258 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 RGS3P49796 1198 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 HMGCS2P54868 508 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 CCL14Q16627 93 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 SLC39A5Q6ZMH5 540 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
CDHR3-209ENST00000472116 DIXDC1Q155Q3 683 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 TRIM60Q495X7 471 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
CDHR3-209ENST00000472116 NECAB3Q96P71 396 aaPredicted RBP12.89□□□□□ -0.35
CDHR3-209ENST00000472116 AS3MTQ9HBK9 375 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 PDLIM7Q9NR12 457 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 TMOD4Q9NZQ9 345 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
CDHR3-209ENST00000472116 FLIIQ13045 1269 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 G2E3Q7L622 706 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
CDHR3-209ENST00000472116 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
CDHR3-209ENST00000472116 TACC3Q9Y6A5 838 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 UTYO14607 1347 aa12.88□□□□□ -0.35
CDHR3-209ENST00000472116 LDHBP07195 334 aaKnown RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 RAG1P15918 1043 aa12.87□□□□□ -0.35
CDHR3-209ENST00000472116 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
CDHR3-209ENST00000472116 FPGSQ05932 587 aa12.87□□□□□ -0.35
CDHR3-209ENST00000472116 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
CDHR3-209ENST00000472116 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 GTF3C2Q8WUA4 911 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms