RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 C7orf61Q8IZ16 206 aa8.51□□□□□ -1.05
SF3A3-205ENST00000470585 SUCLG2Q96I99 432 aa8.51□□□□□ -1.05
SF3A3-205ENST00000470585 UBE2OQ9C0C9 1292 aaKnown RBP8.51□□□□□ -1.05
SF3A3-205ENST00000470585 OSBPL5Q9H0X9 879 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-205ENST00000470585 GINM1Q9NU53 330 aa8.51□□□□□ -1.05
SF3A3-205ENST00000470585 MORF4L1Q9UBU8 362 aa8.51□□□□□ -1.05
SF3A3-205ENST00000470585 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
SF3A3-205ENST00000470585 LRRFIP2Q9Y608 721 aaKnown RBP8.51□□□□□ -1.05
SF3A3-205ENST00000470585 IGSF3O75054 1194 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 CIAO1O76071 339 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 COL6A1P12109 1028 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 NFIAQ12857 509 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 DDX60LQ5H9U9 1706 aaKnown RBP8.5□□□□□ -1.05
SF3A3-205ENST00000470585 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 GADL1Q6ZQY3 521 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-205ENST00000470585 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
SF3A3-205ENST00000470585 USP40Q9NVE5 1235 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 GJD2Q9UKL4 321 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 IQSEC3Q9UPP2 1182 aaPredicted RBP8.5□□□□□ -1.05
SF3A3-205ENST00000470585 PTPRCP08575 1304 aa8.5□□□□□ -1.05
SF3A3-205ENST00000470585 TMEM265A0A087WTH1 108 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 EYA2O00167 538 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 MSCO60682 206 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 PRDX5P30044 214 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 MAPK4P31152 587 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 TCP10Q12799 353 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 LRRC24Q50LG9 513 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
SF3A3-205ENST00000470585 ANKRD13CQ8N6S4 541 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 ANKRD44Q8N8A2 993 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
SF3A3-205ENST00000470585 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
SF3A3-205ENST00000470585 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
SF3A3-205ENST00000470585 MYH2Q9UKX2 1941 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-205ENST00000470585 HOXA7P31268 230 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-205ENST00000470585 RGS3P49796 1198 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 EXOSC9Q06265 439 aaKnown RBP8.48□□□□□ -1.05
SF3A3-205ENST00000470585 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 NUDT12Q9BQG2 462 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 AS3MTQ9HBK9 375 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
SF3A3-205ENST00000470585 ZMYND8Q9ULU4 1186 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-205ENST00000470585 PFASO15067 1338 aa8.48□□□□□ -1.05
SF3A3-205ENST00000470585 LAMA2P24043 3122 aaKnown RBP8.47□□□□□ -1.05
SF3A3-205ENST00000470585 TRIM75PA6NK02 468 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 PDE3AQ14432 1141 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 DIXDC1Q155Q3 683 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 ZSCAN29Q8IWY8 852 aaPredicted RBP8.47□□□□□ -1.05
SF3A3-205ENST00000470585 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 PRDM6Q9NQX0 595 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 VCANP13611 3396 aa8.47□□□□□ -1.05
SF3A3-205ENST00000470585 PLXNB2O15031 1838 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 USP17L5A8MUK1 530 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 C19orf81C9J6K1 198 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 LDHCP07864 332 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 ASNSP08243 561 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 CAP2P40123 477 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 RFX5P48382 616 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 ATP2B3Q16720 1220 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 TREML2Q5T2D2 321 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 Q7L0L9 218 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 DZIP1Q86YF9 867 aaKnown RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 TRIB2Q92519 343 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 USP6NLQ92738 828 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 GUCD1Q96NT3 240 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 PHF12Q96QT6 1004 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 APBA2Q99767 749 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 LBHD1Q9BQE6 289 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 ASCC2Q9H1I8 757 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 DHX36Q9H2U1 1008 aaKnown RBP8.46□□□□□ -1.06
SF3A3-205ENST00000470585 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 MROH7-TTC4A0A0A0MT08 1334 aa8.46□□□□□ -1.06
SF3A3-205ENST00000470585 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 DDTLA6NHG4 134 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 IL15P40933 162 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 RGS2P41220 211 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 IRX3P78415 501 aaPredicted RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 GSTO1P78417 241 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 ATG9AQ7Z3C6 839 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 ZFPM1Q8IX07 1006 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 GPRC5AQ8NFJ5 357 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 USP44Q9H0E7 712 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.45□□□□□ -1.06
SF3A3-205ENST00000470585 PRKAG2Q9UGJ0 569 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 PIEZO1Q92508 2521 aa8.45□□□□□ -1.06
SF3A3-205ENST00000470585 POTEMA6NI47 508 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 HOXC6P09630 235 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 SYN1P17600 705 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 HMGCS2P54868 508 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms