RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 FGAP02671 866 aa27.34■■□□□ 1.97
SREBF1-208ENST00000469356 DLK2Q6UY11 383 aa27.34■■□□□ 1.97
SREBF1-208ENST00000469356 U3KPZ7 1027 aaPredicted RBP27.34■■□□□ 1.97
SREBF1-208ENST00000469356 MAP3K10Q02779 954 aa27.33■■□□□ 1.97
SREBF1-208ENST00000469356 ANO2Q9NQ90 1003 aa27.33■■□□□ 1.97
SREBF1-208ENST00000469356 ANGEL1Q9UNK9 670 aaKnown RBP27.33■■□□□ 1.97
SREBF1-208ENST00000469356 APLP1P51693 650 aa27.32■■□□□ 1.96
SREBF1-208ENST00000469356 FMR1Q06787 632 aaKnown RBP eCLIP27.32■■□□□ 1.96
SREBF1-208ENST00000469356 MIGA2Q7L4E1 593 aa27.32■■□□□ 1.96
SREBF1-208ENST00000469356 METTL16Q86W50 562 aaKnown RBP27.32■■□□□ 1.96
SREBF1-208ENST00000469356 CDAN1Q8IWY9 1227 aa27.32■■□□□ 1.96
SREBF1-208ENST00000469356 DDX60LQ5H9U9 1706 aaKnown RBP27.31■■□□□ 1.96
SREBF1-208ENST00000469356 PAPPA2Q9BXP8 1791 aa27.31■■□□□ 1.96
SREBF1-208ENST00000469356 PLCD1P51178 756 aa27.31■■□□□ 1.96
SREBF1-208ENST00000469356 PRKG1Q13976 671 aa27.31■■□□□ 1.96
SREBF1-208ENST00000469356 MAP3K11Q16584 847 aa27.31■■□□□ 1.96
SREBF1-208ENST00000469356 IMMTQ16891 758 aaKnown RBP27.31■■□□□ 1.96
SREBF1-208ENST00000469356 SLC4A8Q2Y0W8 1093 aa27.31■■□□□ 1.96
SREBF1-208ENST00000469356 ZNF213O14771 459 aa27.3■■□□□ 1.96
SREBF1-208ENST00000469356 USP2O75604 605 aaPredicted RBP27.3■■□□□ 1.96
SREBF1-208ENST00000469356 PDE4BQ07343 736 aa27.3■■□□□ 1.96
SREBF1-208ENST00000469356 PPARAQ07869 468 aa27.3■■□□□ 1.96
SREBF1-208ENST00000469356 CST9Q5W186 159 aa27.3■■□□□ 1.96
SREBF1-208ENST00000469356 IL25Q9H293 177 aa27.3■■□□□ 1.96
SREBF1-208ENST00000469356 FOXP2O15409 715 aa27.29■■□□□ 1.96
SREBF1-208ENST00000469356 C1QTNF8P60827 252 aa27.29■■□□□ 1.96
SREBF1-208ENST00000469356 MAP3K9P80192 1104 aa27.29■■□□□ 1.96
SREBF1-208ENST00000469356 ANKRD13AQ8IZ07 590 aa27.29■■□□□ 1.96
SREBF1-208ENST00000469356 MAP4K1Q92918 833 aa27.29■■□□□ 1.96
SREBF1-208ENST00000469356 LAMB1P07942 1786 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 EPB41L2O43491 1005 aaKnown RBP27.28■■□□□ 1.96
SREBF1-208ENST00000469356 CYP2D6P10635 497 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 KLRG1Q96E93 195 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 WRNIP1Q96S55 665 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 MKNK2Q9HBH9 465 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 CREBZFQ9NS37 354 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 ANAPC4Q9UJX5 808 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 CSADQ9Y600 493 aa27.28■■□□□ 1.96
SREBF1-208ENST00000469356 SSC5DA1L4H1 1573 aa27.27■■□□□ 1.96
SREBF1-208ENST00000469356 PCP11498 1178 aaKnown RBP27.27■■□□□ 1.96
SREBF1-208ENST00000469356 C16orf86Q6ZW13 317 aa27.27■■□□□ 1.96
SREBF1-208ENST00000469356 LSG1Q9H089 658 aaKnown RBP27.27■■□□□ 1.96
SREBF1-208ENST00000469356 RNF41Q9H4P4 317 aaPredicted RBP27.27■■□□□ 1.96
SREBF1-208ENST00000469356 GINM1Q9NU53 330 aa27.27■■□□□ 1.96
SREBF1-208ENST00000469356 ZNF112Q9UJU3 913 aa27.27■■□□□ 1.96
SREBF1-208ENST00000469356 ABT1Q9ULW3 272 aaKnown RBP27.27■■□□□ 1.96
SREBF1-208ENST00000469356 CYP2D7A0A087X1C5 515 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 CTNND1O60716 968 aaKnown RBP27.26■■□□□ 1.95
SREBF1-208ENST00000469356 PTH1RQ03431 593 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 GABPAQ06546 454 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 RNF20Q5VTR2 975 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 MYH8P13535 1937 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 ROBO3Q96MS0 1386 aa27.26■■□□□ 1.95
SREBF1-208ENST00000469356 CDK8P49336 464 aa27.25■■□□□ 1.95
SREBF1-208ENST00000469356 NT5C2P49902 561 aa27.25■■□□□ 1.95
SREBF1-208ENST00000469356 HUNKP57058 714 aa27.25■■□□□ 1.95
SREBF1-208ENST00000469356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.25■■□□□ 1.95
SREBF1-208ENST00000469356 CCDC17Q96LX7 622 aa27.25■■□□□ 1.95
SREBF1-208ENST00000469356 TLL2Q9Y6L7 1015 aa27.25■■□□□ 1.95
SREBF1-208ENST00000469356 UBE2Q2LH0YL09 131 aa27.24■■□□□ 1.95
SREBF1-208ENST00000469356 CERKLQ49MI3 558 aaPredicted RBP27.24■■□□□ 1.95
SREBF1-208ENST00000469356 TATDN1Q6P1N9 297 aa27.24■■□□□ 1.95
SREBF1-208ENST00000469356 ZNF444Q8N0Y2 327 aaPredicted RBP27.24■■□□□ 1.95
SREBF1-208ENST00000469356 CABP5Q9NP86 173 aa27.24■■□□□ 1.95
SREBF1-208ENST00000469356 RBM8AQ9Y5S9 174 aaKnown RBP27.24■■□□□ 1.95
SREBF1-208ENST00000469356 SIPA1L1O43166 1804 aa27.24■■□□□ 1.95
SREBF1-208ENST00000469356 LDLRAD1Q5T700 205 aa27.23■■□□□ 1.95
SREBF1-208ENST00000469356 SAPCD2Q86UD0 394 aa27.23■■□□□ 1.95
SREBF1-208ENST00000469356 DYNLL2Q96FJ2 89 aa27.23■■□□□ 1.95
SREBF1-208ENST00000469356 HHIPL1Q96JK4 782 aa27.23■■□□□ 1.95
SREBF1-208ENST00000469356 PICK1Q9NRD5 415 aa27.23■■□□□ 1.95
SREBF1-208ENST00000469356 FAM196BA6NMK8 535 aa27.22■■□□□ 1.95
SREBF1-208ENST00000469356 PHF20L1A8MW92 1017 aa27.22■■□□□ 1.95
SREBF1-208ENST00000469356 MFSD6Q6ZSS7 791 aa27.22■■□□□ 1.95
SREBF1-208ENST00000469356 SLC10A4Q96EP9 437 aa27.22■■□□□ 1.95
SREBF1-208ENST00000469356 MCCP23508 829 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 CAP2P40123 477 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 HAND2P61296 217 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 CTDSPL2Q05D32 466 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 NOL9Q5SY16 702 aaKnown RBP27.21■■□□□ 1.95
SREBF1-208ENST00000469356 AKNAD1Q5T1N1 836 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 MOB2Q70IA6 237 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 DNAJC18Q9H819 358 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 FZD1Q9UP38 647 aa27.21■■□□□ 1.95
SREBF1-208ENST00000469356 ASNSP08243 561 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 HSPA6P17066 643 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 SHMT1P34896 483 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 SCYL3Q8IZE3 742 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 STK11IPQ8N1F8 1099 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 STAG1Q8WVM7 1258 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 TBC1D2Q9BYX2 928 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 CNNM2Q9H8M5 875 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 TOMM22Q9NS69 142 aa27.2■■□□□ 1.95
SREBF1-208ENST00000469356 LAMA4Q16363 1823 aa27.2■■□□□ 1.94
SREBF1-208ENST00000469356 ZKSCAN1P17029 563 aaPredicted RBP27.19■■□□□ 1.94
SREBF1-208ENST00000469356 INPP5BP32019 993 aa27.19■■□□□ 1.94
SREBF1-208ENST00000469356 TRDNQ13061 729 aa27.19■■□□□ 1.94
SREBF1-208ENST00000469356 ABCB5Q2M3G0 1257 aa27.19■■□□□ 1.94
SREBF1-208ENST00000469356 VGLL4Q14135 290 aa27.18■■□□□ 1.94
SREBF1-208ENST00000469356 RGMBQ6NW40 437 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms