RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 DDTLA6NHG4 134 aaPredicted RBP14.06□□□□□ -0.16
RNF13-208ENST00000467996 E7EWF7 191 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 HLA-DOAP06340 250 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 KRT32Q14532 448 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 TTC6Q86TZ1 520 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 ZSCAN29Q8IWY8 852 aaPredicted RBP14.06□□□□□ -0.16
RNF13-208ENST00000467996 STK11IPQ8N1F8 1099 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 DHX36Q9H2U1 1008 aaKnown RBP14.06□□□□□ -0.16
RNF13-208ENST00000467996 NEDD4P46934 1319 aa14.06□□□□□ -0.16
RNF13-208ENST00000467996 GREB1LQ9C091 1923 aaPredicted RBP14.05□□□□□ -0.16
RNF13-208ENST00000467996 RASA3Q14644 834 aa14.05□□□□□ -0.16
RNF13-208ENST00000467996 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
RNF13-208ENST00000467996 JAKMIP1Q96N16 626 aaKnown RBP14.05□□□□□ -0.16
RNF13-208ENST00000467996 TMEM39BQ9GZU3 492 aa14.05□□□□□ -0.16
RNF13-208ENST00000467996 SLC3A2P08195 630 aaKnown RBP14.04□□□□□ -0.16
RNF13-208ENST00000467996 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
RNF13-208ENST00000467996 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 C16orf86Q6ZW13 317 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
RNF13-208ENST00000467996 CDAN1Q8IWY9 1227 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
RNF13-208ENST00000467996 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 CSRNP1Q96S65 589 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 EHD4Q9H223 541 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 RNF41Q9H4P4 317 aaPredicted RBP14.04□□□□□ -0.16
RNF13-208ENST00000467996 RRAGCQ9HB90 399 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 INCENPQ9NQS7 918 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 PGAP2Q9UHJ9 254 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
RNF13-208ENST00000467996 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
RNF13-208ENST00000467996 FGRP09769 529 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 PCP11498 1178 aaKnown RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 GABPAQ06546 454 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 PDE4BQ07343 736 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 COL9A3Q14050 684 aaPredicted RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 SLC44A5Q8NCS7 719 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 ZC3H15Q8WU90 426 aaKnown RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 DCPSQ96C86 337 aaKnown RBP14.03□□□□□ -0.16
RNF13-208ENST00000467996 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 NEK1Q96PY6 1258 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 DEFB129Q9H1M3 183 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 CNNM2Q9H8M5 875 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 SERPINB13Q9UIV8 391 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 PPP2R3BQ9Y5P8 575 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
RNF13-208ENST00000467996 DOCK1Q14185 1865 aa14.02□□□□□ -0.16
RNF13-208ENST00000467996 SSC5DA1L4H1 1573 aa14.02□□□□□ -0.16
RNF13-208ENST00000467996 B4E1Z4 1266 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 ORC4O43929 436 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 PRDM1O75626 825 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 SLURP2P0DP57 97 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 CPA1P15085 419 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 PSMA5P28066 241 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 TRDNQ13061 729 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 RABEP1Q15276 862 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.17
RNF13-208ENST00000467996 BLOC1S2Q6QNY1 142 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 RALYLQ86SE5 291 aaKnown RBP14.02□□□□□ -0.17
RNF13-208ENST00000467996 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
RNF13-208ENST00000467996 NKX2-3Q8TAU0 364 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 UPF3BQ9BZI7 483 aaKnown RBP14.02□□□□□ -0.17
RNF13-208ENST00000467996 KRT23Q9C075 422 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 DNAJC18Q9H819 358 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 TOMM22Q9NS69 142 aa14.02□□□□□ -0.17
RNF13-208ENST00000467996 FAM196BA6NMK8 535 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
RNF13-208ENST00000467996 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 RPS6KB1P23443 525 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 CDK8P49336 464 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 METTL16Q86W50 562 aaKnown RBP14.01□□□□□ -0.17
RNF13-208ENST00000467996 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
RNF13-208ENST00000467996 TRIM34Q9BYJ4 488 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 SWAP70Q9UH65 585 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
RNF13-208ENST00000467996 MYH4Q9Y623 1939 aa14□□□□□ -0.17
RNF13-208ENST00000467996 KDM4AO75164 1064 aa14□□□□□ -0.17
RNF13-208ENST00000467996 RASA1P20936 1047 aa14□□□□□ -0.17
RNF13-208ENST00000467996 SHMT1P34896 483 aa14□□□□□ -0.17
RNF13-208ENST00000467996 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
RNF13-208ENST00000467996 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
RNF13-208ENST00000467996 SULF1Q8IWU6 871 aa14□□□□□ -0.17
RNF13-208ENST00000467996 ESR2Q92731 530 aa14□□□□□ -0.17
RNF13-208ENST00000467996 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
RNF13-208ENST00000467996 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
RNF13-208ENST00000467996 CYP46A1Q9Y6A2 500 aa14□□□□□ -0.17
RNF13-208ENST00000467996 RANBP6O60518 1105 aaKnown RBP13.99□□□□□ -0.17
RNF13-208ENST00000467996 NEK4P51957 841 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 ANTXR2P58335 489 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 NBPF12Q5TAG4 269 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms