RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 USP5P45974 858 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 ZNF296Q8WUU4 475 aaPredicted RBP27.25■■□□□ 1.95
TRAF4-207ENST00000461195 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.25■■□□□ 1.952e-8■■□□□ 13.1
TRAF4-207ENST00000461195 MYH1P12882 1939 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 SIPA1L1O43166 1804 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 MYH7P12883 1935 aa27.24■■□□□ 1.95
TRAF4-207ENST00000461195 TCRBV5S4A2TA0A5A2 114 aa27.24■■□□□ 1.95
TRAF4-207ENST00000461195 HDAC1Q13547 482 aaPredicted RBP27.24■■□□□ 1.95
TRAF4-207ENST00000461195 RIOK1Q9BRS2 568 aaKnown RBP27.24■■□□□ 1.95
TRAF4-207ENST00000461195 KCNH4Q9UQ05 1017 aa27.24■■□□□ 1.95
TRAF4-207ENST00000461195 PTPRAP18433 802 aa27.23■■□□□ 1.95
TRAF4-207ENST00000461195 SAP30BPQ9UHR5 308 aaKnown RBP27.23■■□□□ 1.95
TRAF4-207ENST00000461195 PALD1Q9ULE6 856 aa27.23■■□□□ 1.95
TRAF4-207ENST00000461195 SUPT16HQ9Y5B9 1047 aaKnown RBP27.23■■□□□ 1.95
TRAF4-207ENST00000461195 ADD2P35612 726 aa27.22■■□□□ 1.95
TRAF4-207ENST00000461195 CRHR2Q13324 411 aa27.22■■□□□ 1.95
TRAF4-207ENST00000461195 FOXP4Q8IVH2 680 aaPredicted RBP27.22■■□□□ 1.95
TRAF4-207ENST00000461195 FAM43AQ8N2R8 423 aa27.22■■□□□ 1.95
TRAF4-207ENST00000461195 GCC1Q96CN9 775 aa27.22■■□□□ 1.95
TRAF4-207ENST00000461195 ZHX2Q9Y6X8 837 aa27.22■■□□□ 1.95
TRAF4-207ENST00000461195 TNRC18O15417 2968 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-207ENST00000461195 ATAD5Q96QE3 1844 aa27.21■■□□□ 1.95
TRAF4-207ENST00000461195 FKTNO75072 461 aa27.21■■□□□ 1.95
TRAF4-207ENST00000461195 HLA-DOAP06340 250 aa27.21■■□□□ 1.95
TRAF4-207ENST00000461195 ZCCHC17Q9NP64 241 aaKnown RBP27.21■■□□□ 1.95
TRAF4-207ENST00000461195 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-207ENST00000461195 BTBD19C9JJ37 291 aa27.2■■□□□ 1.94
TRAF4-207ENST00000461195 CXCL11O14625 94 aa27.2■■□□□ 1.94
TRAF4-207ENST00000461195 TAF1CQ15572 869 aaPredicted RBP27.2■■□□□ 1.94
TRAF4-207ENST00000461195 TSHZ3Q63HK5 1081 aa27.2■■□□□ 1.94
TRAF4-207ENST00000461195 METTL16Q86W50 562 aaKnown RBP27.2■■□□□ 1.94
TRAF4-207ENST00000461195 CRACR2BQ8N4Y2 399 aaPredicted RBP27.2■■□□□ 1.94
TRAF4-207ENST00000461195 TRIM34Q9BYJ4 488 aa27.2■■□□□ 1.94
TRAF4-207ENST00000461195 CRNKL1Q9BZJ0 848 aaKnown RBP27.2■■□□□ 1.94
TRAF4-207ENST00000461195 PHIPQ8WWQ0 1821 aa27.2■■□□□ 1.94
TRAF4-207ENST00000461195 TTC41PQ6P2S7 1318 aa27.19■■□□□ 1.94
TRAF4-207ENST00000461195 ZSCAN25Q6NSZ9 544 aa27.19■■□□□ 1.94
TRAF4-207ENST00000461195 CTU1Q7Z7A3 348 aaKnown RBP27.19■■□□□ 1.94
TRAF4-207ENST00000461195 EXOC6Q8TAG9 804 aa27.19■■□□□ 1.94
TRAF4-207ENST00000461195 ZFYVE28Q9HCC9 887 aa27.19■■□□□ 1.94
TRAF4-207ENST00000461195 CAP2P40123 477 aa27.18■■□□□ 1.94
TRAF4-207ENST00000461195 UBE3CQ15386 1083 aa27.18■■□□□ 1.94
TRAF4-207ENST00000461195 ANKRD45Q5TZF3 282 aa27.18■■□□□ 1.94
TRAF4-207ENST00000461195 AFG3L2Q9Y4W6 797 aa27.18■■□□□ 1.94
TRAF4-207ENST00000461195 NAV1Q8NEY1 1877 aa27.18■■□□□ 1.94
TRAF4-207ENST00000461195 SLC4A8Q2Y0W8 1093 aa27.17■■□□□ 1.94
TRAF4-207ENST00000461195 LCORLQ8N3X6 602 aa27.17■■□□□ 1.94
TRAF4-207ENST00000461195 DNAJC18Q9H819 358 aa27.17■■□□□ 1.94
TRAF4-207ENST00000461195 PDE4DIPQ5VU43 2346 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 ERC2O15083 957 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 RRP1BQ14684 758 aaKnown RBP27.16■■□□□ 1.94
TRAF4-207ENST00000461195 SLFNL1Q499Z3 407 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 ANKRD23Q86SG2 305 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 TTC6Q86TZ1 520 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 RWDD1Q9H446 243 aaPredicted RBP27.16■■□□□ 1.94
TRAF4-207ENST00000461195 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.16■■□□□ 1.94
TRAF4-207ENST00000461195 PTPRFP10586 1907 aa27.16■■□□□ 1.94
TRAF4-207ENST00000461195 DDX60LQ5H9U9 1706 aaKnown RBP27.16■■□□□ 1.94
TRAF4-207ENST00000461195 SOX10P56693 466 aa27.15■■□□□ 1.94
TRAF4-207ENST00000461195 MOGSQ13724 837 aa27.15■■□□□ 1.94
TRAF4-207ENST00000461195 KBTBD3Q8NAB2 608 aa27.15■■□□□ 1.94
TRAF4-207ENST00000461195 OTUD7AQ8TE49 926 aaPredicted RBP27.15■■□□□ 1.94
TRAF4-207ENST00000461195 ARMT1Q9H993 441 aa27.15■■□□□ 1.94
TRAF4-207ENST00000461195 A0A0G2JLL6 359 aaPredicted RBP27.14■■□□□ 1.94
TRAF4-207ENST00000461195 GLRX3O76003 335 aaKnown RBP27.14■■□□□ 1.94
TRAF4-207ENST00000461195 MBD4O95243 580 aa27.14■■□□□ 1.94
TRAF4-207ENST00000461195 MX1P20591 662 aa27.14■■□□□ 1.94
TRAF4-207ENST00000461195 FASTKD5Q7L8L6 764 aaKnown RBP27.14■■□□□ 1.94
TRAF4-207ENST00000461195 PRRT2Q7Z6L0 340 aaPredicted RBP27.14■■□□□ 1.94
TRAF4-207ENST00000461195 CCDC84Q86UT8 332 aaPredicted RBP27.14■■□□□ 1.94
TRAF4-207ENST00000461195 TBC1D2Q9BYX2 928 aa27.14■■□□□ 1.94
TRAF4-207ENST00000461195 EHD4Q9H223 541 aa27.14■■□□□ 1.94
TRAF4-207ENST00000461195 SERPINB13Q9UIV8 391 aa27.14■■□□□ 1.94
TRAF4-207ENST00000461195 TRIM75PA6NK02 468 aa27.13■■□□□ 1.93
TRAF4-207ENST00000461195 CHGBP05060 677 aa27.13■■□□□ 1.93
TRAF4-207ENST00000461195 PI4K2BQ8TCG2 481 aa27.13■■□□□ 1.93
TRAF4-207ENST00000461195 SDR42E1Q8WUS8 393 aa27.13■■□□□ 1.93
TRAF4-207ENST00000461195 USP17L5A8MUK1 530 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 PDHXO00330 501 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 POLR3DP05423 398 aaPredicted RBP27.12■■□□□ 1.93
TRAF4-207ENST00000461195 ASNSP08243 561 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 SP3Q02447 781 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 PKN2Q16513 984 aaKnown RBP27.12■■□□□ 1.93
TRAF4-207ENST00000461195 ERO1AQ96HE7 468 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 GINM1Q9NU53 330 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 MCM9Q9NXL9 1143 aa27.12■■□□□ 1.93
TRAF4-207ENST00000461195 TLR2O60603 784 aa27.11■■□□□ 1.93
TRAF4-207ENST00000461195 GADL1Q6ZQY3 521 aa27.11■■□□□ 1.93
TRAF4-207ENST00000461195 ZNF280CQ8ND82 737 aa27.11■■□□□ 1.93
TRAF4-207ENST00000461195 DCP1AQ9NPI6 582 aaPredicted RBP27.11■■□□□ 1.93
TRAF4-207ENST00000461195 ATP8A2Q9NTI2 1148 aa27.11■■□□□ 1.93
TRAF4-207ENST00000461195 SALL3Q9BXA9 1300 aa27.11■■□□□ 1.93
TRAF4-207ENST00000461195 PLCD1P51178 756 aa27.1■■□□□ 1.93
TRAF4-207ENST00000461195 SPP2Q13103 211 aa27.1■■□□□ 1.93
TRAF4-207ENST00000461195 GPAT2Q6NUI2 795 aa27.1■■□□□ 1.93
TRAF4-207ENST00000461195 PUS7LQ9H0K6 701 aaKnown RBP27.1■■□□□ 1.93
TRAF4-207ENST00000461195 AS3MTQ9HBK9 375 aa27.1■■□□□ 1.93
TRAF4-207ENST00000461195 GDF11O95390 407 aa27.09■■□□□ 1.93
TRAF4-207ENST00000461195 ZFYP08048 801 aaPredicted RBP27.09■■□□□ 1.93
TRAF4-207ENST00000461195 LRRFIP1Q32MZ4 808 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms