RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-207ENST00000461113 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
HDAC4-207ENST00000461113 NECAB2Q7Z6G3 386 aa15.26■□□□□ 0.03
HDAC4-207ENST00000461113 MAST3O60307 1309 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 ZBTB22O15209 634 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 CAPN2P17655 700 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 CACNB3P54284 484 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 PPATQ06203 517 aa15.25■□□□□ 0.03
HDAC4-207ENST00000461113 DBNLQ9UJU6 430 aaKnown RBP15.25■□□□□ 0.03
HDAC4-207ENST00000461113 LDHBP07195 334 aaKnown RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 BCRP11274 1271 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 CRKP46108 304 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 FLT3LGP49771 235 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 SPATA5Q8NB90 893 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 UBE2OQ9C0C9 1292 aaKnown RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 CRISPLD2Q9H0B8 497 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 PAK6Q9NQU5 681 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-207ENST00000461113 ECM29Q5VYK3 1845 aa15.24■□□□□ 0.03
HDAC4-207ENST00000461113 PDS5AQ29RF7 1337 aaKnown RBP15.23■□□□□ 0.03
HDAC4-207ENST00000461113 SMARCA5O60264 1052 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-207ENST00000461113 CYP2C8P10632 490 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 MOGSQ13724 837 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 RASGRF1Q13972 1273 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 VCANP13611 3396 aa15.23■□□□□ 0.03
HDAC4-207ENST00000461113 SPTBN5Q9NRC6 3674 aaKnown RBP15.22■□□□□ 0.03
HDAC4-207ENST00000461113 INPP5BP32019 993 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 DZIP1Q86YF9 867 aaKnown RBP15.22■□□□□ 0.03
HDAC4-207ENST00000461113 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 PARK7Q99497 189 aaKnown RBP15.22■□□□□ 0.03
HDAC4-207ENST00000461113 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 LRP2BPQ9P2M1 347 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 KCNH4Q9UQ05 1017 aa15.22■□□□□ 0.03
HDAC4-207ENST00000461113 SALL1Q9NSC2 1324 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 ERC2O15083 957 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 GSTO1P78417 241 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 HDLBPQ00341 1268 aaKnown RBP15.21■□□□□ 0.03
HDAC4-207ENST00000461113 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 HOOK2Q96ED9 719 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 FAM161BQ96MY7 647 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
HDAC4-207ENST00000461113 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.03
HDAC4-207ENST00000461113 IGSF3O75054 1194 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-207ENST00000461113 GRIK5Q16478 980 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 DCAF15Q66K64 600 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 SMC5Q8IY18 1101 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
HDAC4-207ENST00000461113 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 ECHDC1Q9NTX5 307 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
HDAC4-207ENST00000461113 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 TNPO2O14787 897 aaKnown RBP15.19■□□□□ 0.02
HDAC4-207ENST00000461113 IGHDP01880 384 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 LDHCP07864 332 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 MCAMP43121 646 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 IRF5Q13568 498 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 GPAT2Q6NUI2 795 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 ANKLE1Q8NAG6 615 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
HDAC4-207ENST00000461113 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
HDAC4-207ENST00000461113 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC4-207ENST00000461113 ATP5JP18859 108 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 COL9A1P20849 921 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 MAP3K12Q12852 859 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 FAM109BQ6ICB4 259 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-207ENST00000461113 FAM83AQ86UY5 434 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 CCDC136Q96JN2 1154 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
HDAC4-207ENST00000461113 TMOD2Q9NZR1 351 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 A0A1B0GUL6 1792 aa15.18■□□□□ 0.02
HDAC4-207ENST00000461113 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 ZAP70P43403 619 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
HDAC4-207ENST00000461113 GLRX3O76003 335 aaKnown RBP15.16■□□□□ 0.02
HDAC4-207ENST00000461113 MX1P20591 662 aa15.16■□□□□ 0.02
HDAC4-207ENST00000461113 PRDX5P30044 214 aa15.16■□□□□ 0.02
HDAC4-207ENST00000461113 NUCB1Q02818 461 aa15.16■□□□□ 0.02
HDAC4-207ENST00000461113 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
HDAC4-207ENST00000461113 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-207ENST00000461113 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
HDAC4-207ENST00000461113 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
HDAC4-207ENST00000461113 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC4-207ENST00000461113 ARAP2Q8WZ64 1704 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms