RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 KIF2CQ99661 725 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 ZNF287Q9HBT7 754 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 SWAP70Q9UH65 585 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 HERC5Q9UII4 1024 aaKnown RBP13.36□□□□□ -0.27
TRAF4-206ENST00000454852 SERPINB13Q9UIV8 391 aa13.36□□□□□ -0.27
TRAF4-206ENST00000454852 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 E7EWF7 191 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 CYP2D6P10635 497 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 PDE4BQ07343 736 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 HOOK2Q96ED9 719 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 TMEM39BQ9GZU3 492 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 NMRK2Q9NPI5 230 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 SAP30BPQ9UHR5 308 aaKnown RBP13.35□□□□□ -0.27
TRAF4-206ENST00000454852 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
TRAF4-206ENST00000454852 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
TRAF4-206ENST00000454852 PSMA5P28066 241 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 HAND2P61296 217 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 MTA3Q9BTC8 594 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
TRAF4-206ENST00000454852 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
TRAF4-206ENST00000454852 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 CDK8P49336 464 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 EVX2Q03828 476 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 SUPT20HL1Q3ZLR7 823 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 KRT23Q9C075 422 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
TRAF4-206ENST00000454852 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 SHMT1P34896 483 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 TRDNQ13061 729 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 ADCK5Q3MIX3 580 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 EAPPQ56P03 285 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-206ENST00000454852 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-206ENST00000454852 CDAN1Q8IWY9 1227 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-206ENST00000454852 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-206ENST00000454852 GREB1LQ9C091 1923 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-206ENST00000454852 NEDD4P46934 1319 aa13.32□□□□□ -0.28
TRAF4-206ENST00000454852 PAPPA2Q9BXP8 1791 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 RASA1P20936 1047 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 EXOSC10Q01780 885 aaKnown RBP13.31□□□□□ -0.28
TRAF4-206ENST00000454852 RABEP1Q15276 862 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 NBPF12Q5TAG4 269 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-206ENST00000454852 DCAF15Q66K64 600 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 ESR2Q92731 530 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-206ENST00000454852 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 TCP11L1Q9NUJ3 509 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 ZNF112Q9UJU3 913 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 MYH8P13535 1937 aa13.31□□□□□ -0.28
TRAF4-206ENST00000454852 ADM5C9JUS6 153 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 KIF3CO14782 793 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 NOVP48745 357 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 DHX32Q7L7V1 743 aaKnown RBP13.3□□□□□ -0.28
TRAF4-206ENST00000454852 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
TRAF4-206ENST00000454852 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-206ENST00000454852 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 JAKMIP1Q96N16 626 aaKnown RBP13.3□□□□□ -0.28
TRAF4-206ENST00000454852 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
TRAF4-206ENST00000454852 UNCXA6NJT0 531 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 RPS6KB1P23443 525 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 MCM5P33992 734 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 SLC4A8Q2Y0W8 1093 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 USP48Q86UV5 1035 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-206ENST00000454852 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 CDCA5Q96FF9 252 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-206ENST00000454852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAF4-206ENST00000454852 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 ZSWIM5Q9P217 1185 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 SCAF8Q9UPN6 1271 aaKnown RBP13.29□□□□□ -0.28
TRAF4-206ENST00000454852 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
TRAF4-206ENST00000454852 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms