RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 NAA25Q14CX7 972 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 FERP16591 822 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 DMTNQ08495 405 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 EYA3Q99504 573 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 DSCC1Q9BVC3 393 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 KCNK9Q9NPC2 374 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 NKIRAS1Q9NYS0 192 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
SEC16A-207ENST00000453963 MBD4O95243 580 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 ALDH3A1P30838 453 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 TRIM7Q9C029 511 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 CEP83Q9Y592 693 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 TRAF5O00463 557 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 LDHBP07195 334 aaKnown RBP13.46□□□□□ -0.25
SEC16A-207ENST00000453963 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
SEC16A-207ENST00000453963 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 TTC6Q86TZ1 520 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 PPFIBP2Q8ND30 876 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 TDRD7Q8NHU6 1098 aaKnown RBP13.46□□□□□ -0.26
SEC16A-207ENST00000453963 KIF21AQ7Z4S6 1674 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 ATP8B1O43520 1251 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.26
SEC16A-207ENST00000453963 RAPGEF1Q13905 1077 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 JDP2Q8WYK2 163 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.26
SEC16A-207ENST00000453963 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.26
SEC16A-207ENST00000453963 SLAIN2Q9P270 581 aa13.46□□□□□ -0.26
SEC16A-207ENST00000453963 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 TNNI2P48788 182 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 PPP1R7Q15435 360 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
SEC16A-207ENST00000453963 PYCARDQ9ULZ3 195 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 GPAA1O43292 621 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 CDC25BP30305 580 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 INTS8Q75QN2 995 aaKnown RBP13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEC16A-207ENST00000453963 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 PLIN2Q99541 437 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 KDM5DQ9BY66 1539 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 FAM13AO94988 1023 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 ATP5JP18859 108 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 POLD1P28340 1107 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
SEC16A-207ENST00000453963 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 PABPN1LA6NDY0 278 aaKnown RBP13.44□□□□□ -0.26
SEC16A-207ENST00000453963 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 A1BGP04217 495 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 USP28Q96RU2 1077 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 ZKSCAN3Q9BRR0 538 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 TAB2Q9NYJ8 693 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 SAR1BQ9Y6B6 198 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 PPP2R2CQ9Y2T4 447 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 ATP11AP98196 1134 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 CUL4AQ13619 759 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 CEP128Q6ZU80 1094 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
SEC16A-207ENST00000453963 FCHSD1Q86WN1 690 aa13.44□□□□□ -0.26
SEC16A-207ENST00000453963 B4DLN1 442 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 PFKFB1P16118 471 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 MRPL12P52815 198 aaKnown RBP13.43□□□□□ -0.26
SEC16A-207ENST00000453963 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 UTP11Q9Y3A2 253 aaKnown RBP13.43□□□□□ -0.26
SEC16A-207ENST00000453963 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 RGS22Q8NE09 1264 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 TPCN1Q9ULQ1 816 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 E7EWF7 191 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 PFKFB2O60825 505 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 PPFIA4O75335 1185 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 ITGA6P23229 1130 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 CMA1P23946 247 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 MTMR3Q13615 1198 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 MED4Q9NPJ6 270 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms