RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 TTC6Q86TZ1 520 aa23.45■■□□□ 1.34
SNX11-203ENST00000452859 FSD1Q9BTV5 496 aa23.45■■□□□ 1.34
SNX11-203ENST00000452859 RBM19Q9Y4C8 960 aaKnown RBP23.45■■□□□ 1.34
SNX11-203ENST00000452859 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
SNX11-203ENST00000452859 MBD4O95243 580 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 GTF2A2P52657 109 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 OTUD7BQ6GQQ9 843 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 LCORLQ8N3X6 602 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 DDRGK1Q96HY6 314 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 ARMT1Q9H993 441 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 RNF186Q9NXI6 227 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 ALDH1A1P00352 501 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 GJA5P36382 358 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 PPIL2Q13356 520 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 SCYL3Q8IZE3 742 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 APPBP2Q92624 585 aa23.44■■□□□ 1.34
SNX11-203ENST00000452859 TRPA1O75762 1119 aa23.43■■□□□ 1.34
SNX11-203ENST00000452859 SLFNL1Q499Z3 407 aa23.43■■□□□ 1.34
SNX11-203ENST00000452859 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
SNX11-203ENST00000452859 EVI5LQ96CN4 794 aa23.43■■□□□ 1.34
SNX11-203ENST00000452859 ATP8A2Q9NTI2 1148 aa23.43■■□□□ 1.34
SNX11-203ENST00000452859 POLR3DP05423 398 aaPredicted RBP23.42■■□□□ 1.34
SNX11-203ENST00000452859 HSPA8P11142 646 aaKnown RBP23.42■■□□□ 1.34
SNX11-203ENST00000452859 LBX1P52954 281 aa23.42■■□□□ 1.34
SNX11-203ENST00000452859 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
SNX11-203ENST00000452859 FOCADQ5VW36 1801 aa23.42■■□□□ 1.34
SNX11-203ENST00000452859 MYH7P12883 1935 aa23.42■■□□□ 1.34
SNX11-203ENST00000452859 FAM196BA6NMK8 535 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 SNAPC2Q13487 334 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 METTL16Q86W50 562 aaKnown RBP23.41■■□□□ 1.34
SNX11-203ENST00000452859 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
SNX11-203ENST00000452859 MCM9Q9NXL9 1143 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 CDK5RAP2Q96SN8 1893 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 AMOTL1Q8IY63 956 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 SDR42E1Q8WUS8 393 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 SERPINB13Q9UIV8 391 aa23.41■■□□□ 1.34
SNX11-203ENST00000452859 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
SNX11-203ENST00000452859 IRF6O14896 467 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 CHGBP05060 677 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 SLURP2P0DP57 97 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 CETPP11597 493 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 IFNL1Q8IU54 200 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 PLEKHM2Q8IWE5 1019 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 MS4A4AQ96JQ5 239 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 EHD4Q9H223 541 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 OSBPL3Q9H4L5 887 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 DCP1AQ9NPI6 582 aaPredicted RBP23.4■■□□□ 1.34
SNX11-203ENST00000452859 TSKSQ9UJT2 592 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 SLC4A4Q9Y6R1 1079 aa23.4■■□□□ 1.34
SNX11-203ENST00000452859 CCL15-CCL14A0A0B4J2E2 113 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 CAP2P40123 477 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 CCL15Q16663 113 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 SLC4A8Q2Y0W8 1093 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 TICAM2Q86XR7 235 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 ZHX2Q9Y6X8 837 aa23.39■■□□□ 1.33
SNX11-203ENST00000452859 TRIM6-TRIM34B2RNG4 842 aa23.38■■□□□ 1.33
SNX11-203ENST00000452859 PTPRAP18433 802 aa23.38■■□□□ 1.33
SNX11-203ENST00000452859 OSBP2Q969R2 916 aa23.38■■□□□ 1.33
SNX11-203ENST00000452859 PRKAB2O43741 272 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 GNAT2P19087 354 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 STRBPQ96SI9 672 aaKnown RBP23.37■■□□□ 1.33
SNX11-203ENST00000452859 TBC1D2Q9BYX2 928 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 GINM1Q9NU53 330 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 MYH1P12882 1939 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 CXCL11O14625 94 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 TAOK2Q9UL54 1235 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
SNX11-203ENST00000452859 ASNSP08243 561 aa23.36■■□□□ 1.33
SNX11-203ENST00000452859 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
SNX11-203ENST00000452859 IGF2BP3O00425 579 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX11-203ENST00000452859 GPAA1O43292 621 aa23.35■■□□□ 1.33
SNX11-203ENST00000452859 PLCD1P51178 756 aa23.35■■□□□ 1.33
SNX11-203ENST00000452859 ZMYM1Q5SVZ6 1142 aa23.35■■□□□ 1.33
SNX11-203ENST00000452859 RILPL2Q969X0 211 aa23.35■■□□□ 1.33
SNX11-203ENST00000452859 DNAJC18Q9H819 358 aa23.35■■□□□ 1.33
SNX11-203ENST00000452859 GIMAP6Q6P9H5 292 aa23.34■■□□□ 1.33
SNX11-203ENST00000452859 PTPN18Q99952 460 aa23.34■■□□□ 1.33
SNX11-203ENST00000452859 CFHR5Q9BXR6 569 aa23.34■■□□□ 1.33
SNX11-203ENST00000452859 AS3MTQ9HBK9 375 aa23.34■■□□□ 1.33
SNX11-203ENST00000452859 USP17L5A8MUK1 530 aa23.33■■□□□ 1.33
SNX11-203ENST00000452859 TBC1D8O95759 1140 aa23.33■■□□□ 1.33
SNX11-203ENST00000452859 TATDN1Q6P1N9 297 aa23.33■■□□□ 1.33
SNX11-203ENST00000452859 ZCCHC17Q9NP64 241 aaKnown RBP23.33■■□□□ 1.33
SNX11-203ENST00000452859 AFG3L2Q9Y4W6 797 aa23.33■■□□□ 1.33
SNX11-203ENST00000452859 LAMB1P07942 1786 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 APPP05067 770 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 FASTKD5Q7L8L6 764 aaKnown RBP23.33■■□□□ 1.32
SNX11-203ENST00000452859 NACAP1Q9BZK3 213 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 ARPP21Q9UBL0 812 aaPredicted RBP23.33■■□□□ 1.32
SNX11-203ENST00000452859 SWAP70Q9UH65 585 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 DOCK1Q14185 1865 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 NAV1Q8NEY1 1877 aa23.33■■□□□ 1.32
SNX11-203ENST00000452859 USP17L12C9JPN9 530 aa23.32■■□□□ 1.32
SNX11-203ENST00000452859 USP17L21D6R901 530 aa23.32■■□□□ 1.32
SNX11-203ENST00000452859 M0R2C6 588 aa23.32■■□□□ 1.32
SNX11-203ENST00000452859 RRP1BQ14684 758 aaKnown RBP23.32■■□□□ 1.32
SNX11-203ENST00000452859 CERKLQ49MI3 558 aaPredicted RBP23.32■■□□□ 1.32
SNX11-203ENST00000452859 NOM1Q5C9Z4 860 aaKnown RBP23.31■■□□□ 1.32
SNX11-203ENST00000452859 COL13A1Q5TAT6 717 aaPredicted RBP23.31■■□□□ 1.32
SNX11-203ENST00000452859 C12orf60Q5U649 245 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms