RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 TBC1D22AQ8WUA7 517 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
PKP4-206ENST00000452162 PCDHAC2Q9Y5I4 1007 aa12.57□□□□□ -0.4
PKP4-206ENST00000452162 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
PKP4-206ENST00000452162 ELP1O95163 1332 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 ZNF213O14771 459 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 ZBTB22O15209 634 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 ANTXR2P58335 489 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 RESTQ13127 1097 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 PRC1O43663 620 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 MCM5P33992 734 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
PKP4-206ENST00000452162 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
PKP4-206ENST00000452162 FAM173BQ6P4H8 233 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 NCOA7Q8NI08 942 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
PKP4-206ENST00000452162 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
PKP4-206ENST00000452162 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
PKP4-206ENST00000452162 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 PRDX5P30044 214 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
PKP4-206ENST00000452162 ALX1Q15699 326 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
PKP4-206ENST00000452162 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
PKP4-206ENST00000452162 TBC1D10CQ8IV04 446 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 TSPY26PQ9H489 355 aa12.55□□□□□ -0.4
PKP4-206ENST00000452162 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
PKP4-206ENST00000452162 ECM29Q5VYK3 1845 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 MYH15Q9Y2K3 1946 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 WNT10BO00744 389 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
PKP4-206ENST00000452162 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 ABCF2Q9UG63 623 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 ZBED3Q96IU2 234 aaPredicted RBP12.54□□□□□ -0.4
PKP4-206ENST00000452162 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
PKP4-206ENST00000452162 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 SUGT1Q9Y2Z0 365 aa12.54□□□□□ -0.4
PKP4-206ENST00000452162 H3BQV1 296 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 LETM1O95202 739 aaPredicted RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 MBD4O95243 580 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 MMP14P50281 582 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 RBM5P52756 815 aaKnown RBP eCLIP12.53□□□□□ -0.4
PKP4-206ENST00000452162 FSTL1Q12841 308 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
PKP4-206ENST00000452162 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
PKP4-206ENST00000452162 CRKP46108 304 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 DLGAP5Q15398 846 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 NKX2-3Q8TAU0 364 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 LEO1Q8WVC0 666 aaPredicted RBP12.52□□□□□ -0.4
PKP4-206ENST00000452162 RRAGDQ9NQL2 400 aaPredicted RBP12.52□□□□□ -0.4
PKP4-206ENST00000452162 GGA3Q9NZ52 723 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.4
PKP4-206ENST00000452162 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.4
PKP4-206ENST00000452162 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
PKP4-206ENST00000452162 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
PKP4-206ENST00000452162 APPP05067 770 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 FMR1Q06787 632 aaKnown RBP eCLIP12.52□□□□□ -0.413e-6■■■■■ 31.7
PKP4-206ENST00000452162 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
PKP4-206ENST00000452162 DLK2Q6UY11 383 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.41
PKP4-206ENST00000452162 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
PKP4-206ENST00000452162 CEP350Q5VT06 3117 aa12.52□□□□□ -0.41
PKP4-206ENST00000452162 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
PKP4-206ENST00000452162 CYB5R4Q7L1T6 521 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
PKP4-206ENST00000452162 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 GSG1L2A8MUP6 293 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms