RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CNNM2Q9H8M5 875 aa24.97■■□□□ 1.59
VPS13B-204ENST00000441350 RPS6KB1P23443 525 aa24.96■■□□□ 1.59
VPS13B-204ENST00000441350 TRDNQ13061 729 aa24.96■■□□□ 1.59
VPS13B-204ENST00000441350 MB21D2Q8IYB1 491 aaPredicted RBP24.96■■□□□ 1.59
VPS13B-204ENST00000441350 STK11IPQ8N1F8 1099 aa24.96■■□□□ 1.59
VPS13B-204ENST00000441350 DYNLL2Q96FJ2 89 aa24.96■■□□□ 1.59
VPS13B-204ENST00000441350 SIPA1L1O43166 1804 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 ORC4O43929 436 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 GABPAQ06546 454 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 PDE4BQ07343 736 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 C16orf86Q6ZW13 317 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 DHX32Q7L7V1 743 aaKnown RBP24.95■■□□□ 1.58
VPS13B-204ENST00000441350 RALYLQ86SE5 291 aaKnown RBP24.95■■□□□ 1.58
VPS13B-204ENST00000441350 NKX2-3Q8TAU0 364 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 TTC14Q96N46 770 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 KRT23Q9C075 422 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 EHD4Q9H223 541 aa24.95■■□□□ 1.58
VPS13B-204ENST00000441350 POTECB2RU33 542 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 HLA-DOAP06340 250 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 ANP32AP39687 249 aaKnown RBP24.94■■□□□ 1.58
VPS13B-204ENST00000441350 EXOSC10Q01780 885 aaKnown RBP24.94■■□□□ 1.58
VPS13B-204ENST00000441350 TNFAIP1Q13829 316 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 PI4KBQ9UBF8 816 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 PGAP2Q9UHJ9 254 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 B4E1Z4 1266 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 TNNI2P48788 182 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 SERPINB13Q9UIV8 391 aa24.94■■□□□ 1.58
VPS13B-204ENST00000441350 IQCA1LA6NCM1 817 aa24.93■■□□□ 1.58
VPS13B-204ENST00000441350 EPHX2P34913 555 aa24.93■■□□□ 1.58
VPS13B-204ENST00000441350 ANGEL2Q5VTE6 544 aaKnown RBP24.93■■□□□ 1.58
VPS13B-204ENST00000441350 USP50Q70EL3 339 aaPredicted RBP24.93■■□□□ 1.58
VPS13B-204ENST00000441350 METTL16Q86W50 562 aaKnown RBP24.93■■□□□ 1.58
VPS13B-204ENST00000441350 ZSCAN29Q8IWY8 852 aaPredicted RBP24.93■■□□□ 1.58
VPS13B-204ENST00000441350 TAOK2Q9UL54 1235 aa24.93■■□□□ 1.58
VPS13B-204ENST00000441350 ST18O60284 1047 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 MCM5P33992 734 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 CDK8P49336 464 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 RASA3Q14644 834 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 APOBEC3FQ8IUX4 373 aaKnown RBP24.92■■□□□ 1.58
VPS13B-204ENST00000441350 SLC44A5Q8NCS7 719 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 SNX21Q969T3 373 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 TMEM39BQ9GZU3 492 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 ALDH8A1Q9H2A2 487 aaPredicted RBP24.92■■□□□ 1.58
VPS13B-204ENST00000441350 PDRG1Q9NUG6 133 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 WDR19Q8NEZ3 1342 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 PITPNM2Q9BZ72 1349 aa24.92■■□□□ 1.58
VPS13B-204ENST00000441350 KDM4AO75164 1064 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 PRDM1O75626 825 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 CD2BP2O95400 341 aaKnown RBP24.91■■□□□ 1.58
VPS13B-204ENST00000441350 ANTXR2P58335 489 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 RRP12Q5JTH9 1297 aaKnown RBP24.91■■□□□ 1.58
VPS13B-204ENST00000441350 CYB5R4Q7L1T6 521 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 FOXP4Q8IVH2 680 aaPredicted RBP24.91■■□□□ 1.58
VPS13B-204ENST00000441350 TAF1DQ9H5J8 278 aaPredicted RBP24.91■■□□□ 1.58
VPS13B-204ENST00000441350 ZNF287Q9HBT7 754 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 TOMM22Q9NS69 142 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 GGA3Q9NZ52 723 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 ZSWIM5Q9P217 1185 aa24.91■■□□□ 1.58
VPS13B-204ENST00000441350 NT5C2P49902 561 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 ESR2Q92731 530 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 TCEANC2Q96MN5 208 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 CSRNP1Q96S65 589 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 SWAP70Q9UH65 585 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 TEPSINQ96N21 525 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 DEFB129Q9H1M3 183 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 MKNK2Q9HBH9 465 aa24.9■■□□□ 1.58
VPS13B-204ENST00000441350 SCAF8Q9UPN6 1271 aaKnown RBP24.9■■□□□ 1.58
VPS13B-204ENST00000441350 PRC1O43663 620 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 RASA1P20936 1047 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 CHST3Q7LGC8 479 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 CDAN1Q8IWY9 1227 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 FBXL16Q8N461 479 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 DNAJC18Q9H819 358 aa24.89■■□□□ 1.57
VPS13B-204ENST00000441350 POLR2AP24928 1970 aaKnown RBP24.89■■□□□ 1.57
VPS13B-204ENST00000441350 AK2P54819 239 aa24.88■■□□□ 1.57
VPS13B-204ENST00000441350 ZC3H15Q8WU90 426 aaKnown RBP24.88■■□□□ 1.57
VPS13B-204ENST00000441350 AGXT2Q9BYV1 514 aa24.88■■□□□ 1.57
VPS13B-204ENST00000441350 RANBP6O60518 1105 aaKnown RBP24.87■■□□□ 1.57
VPS13B-204ENST00000441350 SHMT1P34896 483 aa24.87■■□□□ 1.57
VPS13B-204ENST00000441350 CRACR2BQ8N4Y2 399 aaPredicted RBP24.87■■□□□ 1.57
VPS13B-204ENST00000441350 SLURP2P0DP57 97 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 TOB2Q14106 344 aaPredicted RBP24.86■■□□□ 1.57
VPS13B-204ENST00000441350 Q6ZUG5 572 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 ZNF444Q8N0Y2 327 aaPredicted RBP24.86■■□□□ 1.57
VPS13B-204ENST00000441350 MTA3Q9BTC8 594 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 LRRC2Q9BYS8 371 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 TBC1D2Q9BYX2 928 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 HERC5Q9UII4 1024 aaKnown RBP24.86■■□□□ 1.57
VPS13B-204ENST00000441350 MYH8P13535 1937 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 MAP3K10Q02779 954 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 PNMA8AQ86V59 439 aaPredicted RBP24.86■■□□□ 1.57
VPS13B-204ENST00000441350 PPP2R3BQ9Y5P8 575 aa24.86■■□□□ 1.57
VPS13B-204ENST00000441350 TBC1D12O60347 775 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 MCM2P49736 904 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 FAM47AQ5JRC9 791 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 TATDN1Q6P1N9 297 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 IGDCC4Q8TDY8 1250 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 TMEM87BQ96K49 555 aa24.85■■□□□ 1.57
VPS13B-204ENST00000441350 FAM196BA6NMK8 535 aa24.84■■□□□ 1.57
VPS13B-204ENST00000441350 TFAP4Q01664 338 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms