RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 PTPRAP18433 802 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
LTBR-202ENST00000440421 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
LTBR-202ENST00000440421 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
LTBR-202ENST00000440421 CTU1Q7Z7A3 348 aaKnown RBP16.65■□□□□ 0.26
LTBR-202ENST00000440421 CCDC84Q86UT8 332 aaPredicted RBP16.65■□□□□ 0.26
LTBR-202ENST00000440421 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
LTBR-202ENST00000440421 SIPA1L1O43166 1804 aa16.64■□□□□ 0.25
LTBR-202ENST00000440421 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
LTBR-202ENST00000440421 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
LTBR-202ENST00000440421 RRP1BQ14684 758 aaKnown RBP16.64■□□□□ 0.25
LTBR-202ENST00000440421 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
LTBR-202ENST00000440421 RIOK1Q9BRS2 568 aaKnown RBP16.64■□□□□ 0.25
LTBR-202ENST00000440421 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
LTBR-202ENST00000440421 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■□□ 15.4
LTBR-202ENST00000440421 HERC5Q9UII4 1024 aaKnown RBP16.64■□□□□ 0.25
LTBR-202ENST00000440421 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
LTBR-202ENST00000440421 CHGBP05060 677 aa16.63■□□□□ 0.25
LTBR-202ENST00000440421 HLA-DOAP06340 250 aa16.63■□□□□ 0.25
LTBR-202ENST00000440421 ADD2P35612 726 aa16.63■□□□□ 0.25
LTBR-202ENST00000440421 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
LTBR-202ENST00000440421 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
LTBR-202ENST00000440421 MYH1P12882 1939 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 CXCL11O14625 94 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 CAP2P40123 477 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
LTBR-202ENST00000440421 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
LTBR-202ENST00000440421 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
LTBR-202ENST00000440421 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 AFG3L2Q9Y4W6 797 aa16.62■□□□□ 0.25
LTBR-202ENST00000440421 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 TRIM75PA6NK02 468 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 PDHXO00330 501 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 MOGSQ13724 837 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 ANKRD45Q5TZF3 282 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 ANKRD23Q86SG2 305 aa16.61■□□□□ 0.25
LTBR-202ENST00000440421 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
LTBR-202ENST00000440421 MBD4O95243 580 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 SP3Q02447 781 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
LTBR-202ENST00000440421 GADL1Q6ZQY3 521 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 SDR42E1Q8WUS8 393 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 ZCCHC17Q9NP64 241 aaKnown RBP16.6■□□□□ 0.25
LTBR-202ENST00000440421 PHIPQ8WWQ0 1821 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 MYH7P12883 1935 aa16.6■□□□□ 0.25
LTBR-202ENST00000440421 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 A0A0G2JLL6 359 aaPredicted RBP16.59■□□□□ 0.25
LTBR-202ENST00000440421 GDF11O95390 407 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 JAG1P78504 1218 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 UBE3CQ15386 1083 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
LTBR-202ENST00000440421 ZSCAN25Q6NSZ9 544 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 GPAT2Q6NUI2 795 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 PRRT2Q7Z6L0 340 aaPredicted RBP16.59■□□□□ 0.25
LTBR-202ENST00000440421 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
LTBR-202ENST00000440421 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
LTBR-202ENST00000440421 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 PRKAB2O43741 272 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 TLR2O60603 784 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
LTBR-202ENST00000440421 PLCD1P51178 756 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 SPP2Q13103 211 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 AAMPQ13685 434 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 FASTKD5Q7L8L6 764 aaKnown RBP16.58■□□□□ 0.24
LTBR-202ENST00000440421 KBTBD3Q8NAB2 608 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
LTBR-202ENST00000440421 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
LTBR-202ENST00000440421 ERC2O15083 957 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
LTBR-202ENST00000440421 ASNSP08243 561 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 MX1P20591 662 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 PKN2Q16513 984 aaKnown RBP16.57■□□□□ 0.24
LTBR-202ENST00000440421 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
LTBR-202ENST00000440421 DCP1AQ9NPI6 582 aaPredicted RBP16.57■□□□□ 0.24
LTBR-202ENST00000440421 CPA4Q9UI42 421 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 PTPRFP10586 1907 aa16.57■□□□□ 0.24
LTBR-202ENST00000440421 CYP2C8P10632 490 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 CYP2D6P10635 497 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
LTBR-202ENST00000440421 CAP1Q01518 475 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 EVX2Q03828 476 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 OTOP1Q7RTM1 612 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 EHD4Q9H223 541 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
LTBR-202ENST00000440421 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms