RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ARMT1Q9H993 441 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 TLL2Q9Y6L7 1015 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 MYH13Q9UKX3 1938 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 FAM205AQ6ZU69 1335 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 SCN4AP35499 1836 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 LETM1O95202 739 aaPredicted RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 SPDYE2Q495Y8 402 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ARMC9Q7Z3E5 817 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 CRACR2BQ8N4Y2 399 aaPredicted RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ANP32BQ92688 251 aaKnown RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 TRIM34Q9BYJ4 488 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 SH2B1Q9NRF2 756 aaPredicted RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ATP6V1DQ9Y5K8 247 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 CNTNAP1P78357 1384 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 MPHOSPH10O00566 681 aaKnown RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 CLCN1P35523 988 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 TNNI2P48788 182 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 TNFAIP1Q13829 316 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 VGLL4Q14135 290 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 SUPT20HL1Q3ZLR7 823 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 CLEC10AQ8IUN9 316 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 RGS22Q8NE09 1264 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 OPTNQ96CV9 577 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 TMX3Q96JJ7 454 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 R3HDMLQ9H3Y0 253 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ECHDC1Q9NTX5 307 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 LMBRD1Q9NUN5 540 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 FAM198AQ9UFP1 575 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.62□□□□□ -1.51
EDEM3-203ENST00000439962 CSADQ9Y600 493 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ZNF609O15014 1411 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 ZNF532Q9HCE3 1301 aa5.62□□□□□ -1.51
EDEM3-203ENST00000439962 USP2O75604 605 aaPredicted RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 ECE1P42892 770 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 TSGA10IPQ3SY00 556 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 CCDC129Q6ZRS4 1044 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 KIAA1211Q6ZU35 1233 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 SLC44A5Q8NCS7 719 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 ZDHHC15Q96MV8 337 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 BRPF3Q9ULD4 1205 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 ZHX2Q9Y6X8 837 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 CCDC171Q6TFL3 1326 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 PDE4DIPQ5VU43 2346 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MINDY4BA8MYZ0 360 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 IRF6O14896 467 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 PRDM1O75626 825 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 UQCRFS1P1P0C7P4 283 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 CYP2D6P10635 497 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MCM5P33992 734 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 IREB2P48200 963 aaKnown RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MAP3K12Q12852 859 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 ANKRD1Q15327 319 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 VPS53Q5VIR6 699 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 SPTY2D1Q68D10 685 aaPredicted RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 C15orf52Q6ZUT6 534 aaKnown RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 TNS4Q8IZW8 715 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 TTC14Q96N46 770 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 FSD1Q9BTV5 496 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 LSG1Q9H089 658 aaKnown RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MCM9Q9NXL9 1143 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 FBXO3Q9UK99 471 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 DDX49Q9Y6V7 483 aaKnown RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MROH7-TTC4A0A0A0MT08 1334 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 RASSF10A6NK89 507 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 WDHD1O75717 1129 aaPredicted RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MBD4O95243 580 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 NEK4P51957 841 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 SH3BP5LQ7L8J4 393 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 LCORLQ8N3X6 602 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 ZGPATQ8N5A5 531 aaKnown RBP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 FAM184AQ8NB25 1140 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 DYNLL2Q96FJ2 89 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.61□□□□□ -1.51
EDEM3-203ENST00000439962 GPR108Q9NPR9 543 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 TOMM22Q9NS69 142 aa5.61□□□□□ -1.51
EDEM3-203ENST00000439962 MYH15Q9Y2K3 1946 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 CCDC85CA6NKD9 419 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 PDE6AP16499 860 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 PSMA5P28066 241 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 ARID4AP29374 1257 aaPredicted RBP5.6□□□□□ -1.51
EDEM3-203ENST00000439962 GJA5P36382 358 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 TERF1P54274 439 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 NOGQ13253 232 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.6□□□□□ -1.51
EDEM3-203ENST00000439962 RASAL3Q86YV0 1011 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 TEPSINQ96N21 525 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 PUS7LQ9H0K6 701 aaKnown RBP5.6□□□□□ -1.51
EDEM3-203ENST00000439962 ANO2Q9NQ90 1003 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 PGAP2Q9UHJ9 254 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 COL6A3P12111 3177 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 RPAP1Q9BWH6 1393 aaPredicted RBP5.6□□□□□ -1.51
EDEM3-203ENST00000439962 MAST3O60307 1309 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 MAGEB6P1A0A0J9YX57 407 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 BAG3O95817 575 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 CYP2C8P10632 490 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms