RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 APOA5Q6Q788 366 aa25.92■■□□□ 1.74
VSX1-205ENST00000429762 LARGE2Q8N3Y3 721 aa25.92■■□□□ 1.74
VSX1-205ENST00000429762 FOCADQ5VW36 1801 aa25.92■■□□□ 1.74
VSX1-205ENST00000429762 FGRP09769 529 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 CLEC17AQ6ZS10 378 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 SLC44A5Q8NCS7 719 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 TEKT1Q969V4 418 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 UBAC1Q9BSL1 405 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 MYH1P12882 1939 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 TNKSO95271 1327 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 CDC37L1Q7L3B6 337 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 LLPHQ9BRT6 129 aaKnown RBP25.91■■□□□ 1.74
VSX1-205ENST00000429762 USP40Q9NVE5 1235 aa25.91■■□□□ 1.74
VSX1-205ENST00000429762 CCDC69A6NI79 296 aa25.9■■□□□ 1.74
VSX1-205ENST00000429762 SLC3A2P08195 630 aaKnown RBP25.9■■□□□ 1.74
VSX1-205ENST00000429762 SGMS1Q86VZ5 419 aa25.9■■□□□ 1.74
VSX1-205ENST00000429762 CERS3Q8IU89 383 aa25.9■■□□□ 1.74
VSX1-205ENST00000429762 DDX11L8A8MPP1 907 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 ORC4O43929 436 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 NMT2O60551 498 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 RAD17O75943 681 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 LIFRP42702 1097 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 METAP2P50579 478 aaKnown RBP eCLIP25.89■■□□□ 1.74
VSX1-205ENST00000429762 SART3Q15020 963 aaKnown RBP25.89■■□□□ 1.74
VSX1-205ENST00000429762 GRIPAP1Q4V328 841 aa25.89■■□□□ 1.74
VSX1-205ENST00000429762 DDX4Q9NQI0 724 aaKnown RBP25.89■■□□□ 1.74
VSX1-205ENST00000429762 ERICH2A1L162 156 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 ZBTB43O43298 467 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 F13A1P00488 732 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 APOBEC3HQ6NTF7 200 aaKnown RBP25.89■■□□□ 1.73
VSX1-205ENST00000429762 CDC42EP5Q6NZY7 148 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 FAM184AQ8NB25 1140 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 SLC12A7Q9Y666 1083 aa25.89■■□□□ 1.73
VSX1-205ENST00000429762 CDC27P30260 824 aa25.88■■□□□ 1.73
VSX1-205ENST00000429762 ADD1P35611 737 aaKnown RBP25.88■■□□□ 1.73
VSX1-205ENST00000429762 RBM5P52756 815 aaKnown RBP eCLIP25.88■■□□□ 1.73
VSX1-205ENST00000429762 PDE4BQ07343 736 aa25.88■■□□□ 1.73
VSX1-205ENST00000429762 SEC23AQ15436 765 aa25.88■■□□□ 1.73
VSX1-205ENST00000429762 HHIPL2Q6UWX4 724 aa25.88■■□□□ 1.73
VSX1-205ENST00000429762 AMOTL1Q8IY63 956 aa25.88■■□□□ 1.73
VSX1-205ENST00000429762 ZSCAN10Q96SZ4 725 aaPredicted RBP25.88■■□□□ 1.73
VSX1-205ENST00000429762 GOLGA8AA7E2F4 631 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 FKBP1AP62942 108 aaKnown RBP25.87■■□□□ 1.73
VSX1-205ENST00000429762 FERMT3Q86UX7 667 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 ENAHQ8N8S7 591 aaPredicted RBP25.87■■□□□ 1.73
VSX1-205ENST00000429762 BCS1LQ9Y276 419 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 PSME4Q14997 1843 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 WDHD1O75717 1129 aaPredicted RBP25.87■■□□□ 1.73
VSX1-205ENST00000429762 PCP11498 1178 aaKnown RBP25.87■■□□□ 1.73
VSX1-205ENST00000429762 NLGN2Q8NFZ4 835 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 ROBO3Q96MS0 1386 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 ECM29Q5VYK3 1845 aa25.87■■□□□ 1.73
VSX1-205ENST00000429762 FDPSP14324 419 aaKnown RBP25.86■■□□□ 1.73
VSX1-205ENST00000429762 CACNB3P54284 484 aa25.86■■□□□ 1.73
VSX1-205ENST00000429762 CPLX1O14810 134 aa25.86■■□□□ 1.73
VSX1-205ENST00000429762 PDCP20941 246 aa25.86■■□□□ 1.73
VSX1-205ENST00000429762 SOGA3Q5TF21 947 aa25.86■■□□□ 1.73
VSX1-205ENST00000429762 CD2APQ9Y5K6 639 aa25.86■■□□□ 1.73
VSX1-205ENST00000429762 TSPY2A6NKD2 308 aa25.85■■□□□ 1.73
VSX1-205ENST00000429762 PSMD14O00487 310 aa25.85■■□□□ 1.73
VSX1-205ENST00000429762 IARSP41252 1262 aaKnown RBP25.85■■□□□ 1.73
VSX1-205ENST00000429762 MKNK2Q9HBH9 465 aa25.85■■□□□ 1.73
VSX1-205ENST00000429762 FAM217BQ9NTX9 383 aaPredicted RBP25.85■■□□□ 1.73
VSX1-205ENST00000429762 FER1L6Q2WGJ9 1857 aa25.85■■□□□ 1.73
VSX1-205ENST00000429762 HMGN5P82970 282 aaKnown RBP25.84■■□□□ 1.73
VSX1-205ENST00000429762 NFIAQ12857 509 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 ZNF654Q8IZM8 581 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 NUP133Q8WUM0 1156 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 ZDHHC15Q96MV8 337 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 TAOK2Q9UL54 1235 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 TFAP4Q01664 338 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 IQCA1Q86XH1 822 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 GDPD2Q9HCC8 539 aa25.84■■□□□ 1.73
VSX1-205ENST00000429762 GUCY1B3Q02153 619 aa25.83■■□□□ 1.73
VSX1-205ENST00000429762 IFIT1BQ5T764 474 aaKnown RBP25.83■■□□□ 1.73
VSX1-205ENST00000429762 SYNE3Q6ZMZ3 975 aa25.83■■□□□ 1.73
VSX1-205ENST00000429762 NIM1KQ8IY84 436 aa25.83■■□□□ 1.73
VSX1-205ENST00000429762 MTA3Q9BTC8 594 aa25.83■■□□□ 1.73
VSX1-205ENST00000429762 ZBTB12Q9Y330 459 aaPredicted RBP25.83■■□□□ 1.73
VSX1-205ENST00000429762 TCHHQ07283 1943 aa25.83■■□□□ 1.72
VSX1-205ENST00000429762 GOLGA6L22H0YM25 854 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 NFKBIEO00221 500 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 DHX16O60231 1041 aaKnown RBP25.82■■□□□ 1.72
VSX1-205ENST00000429762 TRAK2O60296 914 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 PHKBQ93100 1093 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 TAOK3Q9H2K8 898 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 H3BQV1 296 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 CDK8P49336 464 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 IFFO2Q5TF58 517 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 FAM173BQ6P4H8 233 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 RSBN1LQ6PCB5 846 aaPredicted RBP25.82■■□□□ 1.72
VSX1-205ENST00000429762 ZFPM1Q8IX07 1006 aa25.82■■□□□ 1.72
VSX1-205ENST00000429762 ORC3Q9UBD5 711 aaPredicted RBP25.82■■□□□ 1.72
VSX1-205ENST00000429762 PRPF40AO75400 957 aaKnown RBP25.81■■□□□ 1.72
VSX1-205ENST00000429762 RASA1P20936 1047 aa25.81■■□□□ 1.72
VSX1-205ENST00000429762 CNPY2Q9Y2B0 182 aa25.81■■□□□ 1.72
VSX1-205ENST00000429762 RASSF7Q02833 373 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 CFAP100Q494V2 611 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 OTUD7BQ6GQQ9 843 aa25.8■■□□□ 1.72
VSX1-205ENST00000429762 C16orf86Q6ZW13 317 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 425.8 ms