RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
LRCH3-203ENST00000425562 AGXT2Q9BYV1 514 aa15.39■□□□□ 0.05
LRCH3-203ENST00000425562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.053e-7■□□□□ 10.5
LRCH3-203ENST00000425562 MAN1B1Q9UKM7 699 aa15.39■□□□□ 0.05
LRCH3-203ENST00000425562 B4E1Z4 1266 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 ENC1O14682 589 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 CUTAO60888 179 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 METAP2P50579 478 aaKnown RBP eCLIP15.38■□□□□ 0.05
LRCH3-203ENST00000425562 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 GSPT2Q8IYD1 628 aaKnown RBP15.38■□□□□ 0.05
LRCH3-203ENST00000425562 SLC35F6Q8N357 371 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
LRCH3-203ENST00000425562 MED15Q96RN5 788 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 ZKSCAN3Q9BRR0 538 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 TUBE1Q9UJT0 475 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 KCNJ6P48051 423 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 MRPS25P82663 173 aaKnown RBP15.38■□□□□ 0.05
LRCH3-203ENST00000425562 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
LRCH3-203ENST00000425562 BRAPQ7Z569 592 aa15.38■□□□□ 0.05
LRCH3-203ENST00000425562 SNAP23O00161 211 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 ZNF213O14771 459 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 CCDC175P0C221 793 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 SLC20A2Q08357 652 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 BEND6Q5SZJ8 279 aaPredicted RBP15.37■□□□□ 0.05
LRCH3-203ENST00000425562 PACS2Q86VP3 889 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 TRIM10Q9UDY6 481 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 hCG_1642624A0A1W2PR95 340 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
LRCH3-203ENST00000425562 RRP12Q5JTH9 1297 aaKnown RBP15.37■□□□□ 0.05
LRCH3-203ENST00000425562 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
LRCH3-203ENST00000425562 EXOC4Q96A65 974 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
LRCH3-203ENST00000425562 TSPYL1Q9H0U9 437 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 RAI14Q9P0K7 980 aa15.37■□□□□ 0.05
LRCH3-203ENST00000425562 STX10O60499 249 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 GTF2A1P52655 376 aaPredicted RBP15.36■□□□□ 0.05
LRCH3-203ENST00000425562 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
LRCH3-203ENST00000425562 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 SRGAP1Q7Z6B7 1085 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 IGSF22Q8N9C0 903 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 POLD4Q9HCU8 107 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 CAMTA1Q9Y6Y1 1673 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 CCDC151A5D8V7 595 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 PES1O00541 588 aaKnown RBP15.36■□□□□ 0.05
LRCH3-203ENST00000425562 KIF5CO60282 957 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 NR5A1Q13285 461 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 PTPAQ15257 358 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 HSP90B2PQ58FF3 399 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 EEF2KMTQ96G04 330 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 CAPZA3Q96KX2 299 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 IDH1O75874 414 aaKnown RBP15.36■□□□□ 0.05
LRCH3-203ENST00000425562 CASP14P31944 242 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 TRDNQ13061 729 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 TTC19Q6DKK2 380 aaPredicted RBP15.36■□□□□ 0.05
LRCH3-203ENST00000425562 PPFIBP1Q86W92 1011 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 FAM204AQ9H8W3 233 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 HDAC6Q9UBN7 1215 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
LRCH3-203ENST00000425562 LRRIQ3A6PVS8 624 aaPredicted RBP15.35■□□□□ 0.05
LRCH3-203ENST00000425562 POSTNQ15063 836 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 GPATCH11Q8N954 259 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 MST1RQ04912 1400 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 EIF3CLB5ME19 914 aaKnown RBP15.35■□□□□ 0.05
LRCH3-203ENST00000425562 AKR1B15C9JRZ8 316 aaPredicted RBP15.35■□□□□ 0.05
LRCH3-203ENST00000425562 SRGAP2O75044 1071 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 TRIM29Q14134 588 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 CASP8Q14790 479 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 HLFQ16534 295 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 METTL24Q5JXM2 366 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 HDXQ7Z353 690 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
LRCH3-203ENST00000425562 EIF3CQ99613 913 aaKnown RBP15.35■□□□□ 0.05
LRCH3-203ENST00000425562 HPSEQ9Y251 543 aa15.35■□□□□ 0.05
LRCH3-203ENST00000425562 GPAA1O43292 621 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 TUBB4AP04350 444 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 NOP2P46087 812 aaKnown RBP15.34■□□□□ 0.05
LRCH3-203ENST00000425562 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 ADGRG1Q9Y653 693 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 TBX2Q13207 712 aaPredicted RBP15.34■□□□□ 0.05
LRCH3-203ENST00000425562 DNAJC21Q5F1R6 531 aaKnown RBP15.34■□□□□ 0.05
LRCH3-203ENST00000425562 RESP18Q5W5W9 173 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 TBC1D10CQ8IV04 446 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
LRCH3-203ENST00000425562 MAP2K7O14733 419 aa15.33■□□□□ 0.05
LRCH3-203ENST00000425562 GREM2Q9H772 168 aa15.33■□□□□ 0.05
LRCH3-203ENST00000425562 GUCA1BQ9UMX6 200 aa15.33■□□□□ 0.05
LRCH3-203ENST00000425562 PCDHB6Q9Y5E3 794 aa15.33■□□□□ 0.05
LRCH3-203ENST00000425562 FAM205CA6NFA0 338 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.04
LRCH3-203ENST00000425562 RANBP6O60518 1105 aaKnown RBP15.33■□□□□ 0.04
LRCH3-203ENST00000425562 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms