RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 Q6ZVU0 165 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 ANKRD44Q8N8A2 993 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 API5Q9BZZ5 524 aaKnown RBP6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 GREM2Q9H772 168 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 RCAN3Q9UKA8 241 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 PDZRN3Q9UPQ7 1066 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 COL4A1P02462 1669 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 SNED1Q8TER0 1413 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 NUP98P52948 1817 aa6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 AFDNP55196 1824 aaKnown RBP6.57□□□□□ -1.36
TRBV29-1-201ENST00000422143 ANKRD31Q8N7Z5 1873 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 TNRC6CQ9HCJ0 1690 aaKnown RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 KIF13BQ9NQT8 1826 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 CDK2AP1O14519 115 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 ICMTO60725 284 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 ALDH1B1P30837 517 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 CTSWP56202 376 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 RPS8P62241 208 aaKnown RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 FOXK2Q01167 660 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 RASSF7Q02833 373 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 GRAPQ13588 217 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 TNS4Q8IZW8 715 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 TMEM57Q8N5G2 664 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 GRAPLQ8TC17 118 aaPredicted RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 PANK1Q8TE04 598 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 RBM17Q96I25 401 aaKnown RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 MEIS3Q99687 375 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 KLF16Q9BXK1 252 aaPredicted RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRKD2Q9BZL6 878 aa6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 SCHIP1Q9P0W5 487 aaPredicted RBP6.56□□□□□ -1.36
TRBV29-1-201ENST00000422143 KIF16BQ96L93 1317 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 IPO8O15397 1037 aaKnown RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 BBOX1O75936 387 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 CCT4P50991 539 aaKnown RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 FOXC1Q12948 553 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 CLN3Q13286 438 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 RABL6Q3YEC7 729 aaPredicted RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 DDX46Q7L014 1031 aaKnown RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 CYP4X1Q8N118 509 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 GTF3C2Q8WUA4 911 aaPredicted RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 VTI1AQ96AJ9 217 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 BICC1Q9H694 974 aaKnown RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 C9orf78Q9NZ63 289 aaPredicted RBP6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 SERTAD1Q9UHV2 236 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 ATP6V0A2Q9Y487 856 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 HRH3Q9Y5N1 445 aa6.55□□□□□ -1.36
TRBV29-1-201ENST00000422143 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 SNAP23O00161 211 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 GDF9O60383 454 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 ABL1P00519 1130 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 ITGA6P23229 1130 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 RFX5P48382 616 aaPredicted RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PSMA6P60900 246 aaKnown RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 GPSM2P81274 684 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRR20EP86478 221 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRR20CP86479 221 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRR20DP86480 221 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRR20BP86481 221 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PRR20AP86496 221 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 FKBP4Q02790 459 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 CCDC152Q4G0S7 254 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 C9orf131Q5VYM1 1079 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 SP8Q8IXZ3 490 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 PUS3Q9BZE2 481 aaKnown RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 TSPAN10Q9H1Z9 355 aaPredicted RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 ARHGEF10LQ9HCE6 1279 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 TOR4AQ9NXH8 423 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 CHMP3Q9Y3E7 222 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 RTL9Q8NET4 1388 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 ARFGEF2Q9Y6D5 1785 aa6.54□□□□□ -1.36
TRBV29-1-201ENST00000422143 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 A0A1W2PRU2 124 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 PPP1R12BO60237 982 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 IL2RAP01589 272 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 SCNN1AP37088 669 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 PTGIRP43119 386 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 CCDC93Q567U6 631 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 SLC9A9Q8IVB4 645 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 GLYCTKQ8IVS8 523 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 DZIP1LQ8IYY4 767 aaKnown RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 KLHDC4Q8TBB5 520 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 GPR101Q96P66 508 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 RTFDC1Q9BY42 306 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 BIN2Q9UBW5 565 aaPredicted RBP6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 POLLQ9UGP5 575 aa6.53□□□□□ -1.36
TRBV29-1-201ENST00000422143 SEPT3Q9UH03 358 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms