RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 N4BP1O75113 896 aaKnown RBP24.29■■□□□ 1.48
USP48-205ENST00000421625 CIAO1O76071 339 aa24.29■■□□□ 1.48
USP48-205ENST00000421625 TATP17735 454 aaPredicted RBP24.29■■□□□ 1.48
USP48-205ENST00000421625 IPO4Q8TEX9 1081 aaKnown RBP24.29■■□□□ 1.48
USP48-205ENST00000421625 UBN2Q6ZU65 1347 aa24.29■■□□□ 1.48
USP48-205ENST00000421625 TRIM29Q14134 588 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 NTRK3Q16288 839 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 CPLX3Q8WVH0 158 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 ADGRG1Q9Y653 693 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 MEGF6O75095 1541 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 AKR1B15C9JRZ8 316 aaPredicted RBP24.28■■□□□ 1.48
USP48-205ENST00000421625 CSB-PGBD3P0DP91 1061 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 IARSP41252 1262 aaKnown RBP24.28■■□□□ 1.48
USP48-205ENST00000421625 MORC3Q14149 939 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 WWC2Q6AWC2 1192 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 MLKLQ8NB16 471 aa24.28■■□□□ 1.48
USP48-205ENST00000421625 CWC15Q9P013 229 aaKnown RBP24.28■■□□□ 1.48
USP48-205ENST00000421625 B4E1Z4 1266 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 ACTN2P35609 894 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 SLC9C2Q5TAH2 1124 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 NUTM2AQ8IVF1 878 aaPredicted RBP24.27■■□□□ 1.48
USP48-205ENST00000421625 ZBTB3Q9H5J0 574 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 TJP1Q07157 1748 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 SARSP49591 514 aaKnown RBP24.27■■□□□ 1.48
USP48-205ENST00000421625 RGS22Q8NE09 1264 aa24.27■■□□□ 1.48
USP48-205ENST00000421625 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
USP48-205ENST00000421625 TOB1P50616 345 aaPredicted RBP24.26■■□□□ 1.47
USP48-205ENST00000421625 CPLX2Q6PUV4 134 aaKnown RBP24.26■■□□□ 1.47
USP48-205ENST00000421625 PAXIP1Q6ZW49 1069 aaPredicted RBP24.26■■□□□ 1.47
USP48-205ENST00000421625 FAM217BQ9NTX9 383 aaPredicted RBP24.26■■□□□ 1.47
USP48-205ENST00000421625 RSPH14Q9UHP6 348 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 HOOK1Q9UJC3 728 aaKnown RBP24.26■■□□□ 1.47
USP48-205ENST00000421625 CDC23Q9UJX2 597 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 RBL2Q08999 1139 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 NT5DC1Q5TFE4 455 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 SRLQ86TD4 932 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 SLC26A6Q9BXS9 759 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 ATG3Q9NT62 314 aa24.26■■□□□ 1.47
USP48-205ENST00000421625 A0A1B0GTH6 734 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 BTBD18B2RXH4 712 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 CYP27B1O15528 508 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 ZBTB43O43298 467 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 ZNF569Q5MCW4 686 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 HNRNPLLQ8WVV9 542 aaKnown RBP24.25■■□□□ 1.47
USP48-205ENST00000421625 PANX2Q96RD6 677 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 ABCB6Q9NP58 842 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 INCENPQ9NQS7 918 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 GOLGA8AA7E2F4 631 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 NFXL1Q6ZNB6 911 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 BRINP3Q76B58 766 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 FBXO2Q9UK22 296 aaPredicted RBP24.25■■□□□ 1.47
USP48-205ENST00000421625 RRP15Q9Y3B9 282 aaKnown RBP24.25■■□□□ 1.47
USP48-205ENST00000421625 HDXQ7Z353 690 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 NOSTRINQ8IVI9 506 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 DACH1Q9UI36 760 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 RAB21Q9UL25 225 aa24.25■■□□□ 1.47
USP48-205ENST00000421625 KIF1AQ12756 1690 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 KIF5CO60282 957 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 RHOXF2BP0C7M4 288 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 ELOA2Q8IYF1 753 aaPredicted RBP24.24■■□□□ 1.47
USP48-205ENST00000421625 RHOXF2Q9BQY4 288 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 GUCY1A2P33402 732 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 USP5P45974 858 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 APTXQ7Z2E3 356 aaKnown RBP24.24■■□□□ 1.47
USP48-205ENST00000421625 CEP112Q8N8E3 955 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 MSANTD4Q8NCY6 345 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 FAN1Q9Y2M0 1017 aa24.24■■□□□ 1.47
USP48-205ENST00000421625 APPP05067 770 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 IGSF22Q8N9C0 903 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 DCAF5Q96JK2 942 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 L1RE1Q9UN81 338 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 KCNJ14Q9UNX9 436 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 PLCD1P51178 756 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 KIF4BQ2VIQ3 1234 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 FOXR1Q6PIV2 292 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 USP49Q70CQ1 688 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 IQUBQ8NA54 791 aa24.23■■□□□ 1.47
USP48-205ENST00000421625 ABL1P00519 1130 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 PTPREP23469 700 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 CABP4P57796 275 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 IGDCC4Q8TDY8 1250 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 LY9Q9HBG7 655 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 GLI3P10071 1580 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 TNNT3P45378 269 aaPredicted RBP24.22■■□□□ 1.47
USP48-205ENST00000421625 STX17P56962 302 aa24.22■■□□□ 1.47
USP48-205ENST00000421625 A1BGP04217 495 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 VSNL1P62760 191 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 CCDC57Q2TAC2 916 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 KLHL10Q6JEL2 608 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 LEKR1Q6ZMV7 388 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 PPFIBP1Q86W92 1011 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 CDC5LQ99459 802 aaKnown RBP24.21■■□□□ 1.47
USP48-205ENST00000421625 ACTN4O43707 911 aaKnown RBP24.21■■□□□ 1.47
USP48-205ENST00000421625 SLC35F6Q8N357 371 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 PCDHB6Q9Y5E3 794 aa24.21■■□□□ 1.47
USP48-205ENST00000421625 SSRP1Q08945 709 aaKnown RBP24.2■■□□□ 1.47
USP48-205ENST00000421625 DIS3L2Q8IYB7 885 aaKnown RBP24.2■■□□□ 1.47
USP48-205ENST00000421625 MYH7P12883 1935 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms