RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 YEATS4O95619 227 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 FAM160A1Q05DH4 1040 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 ANO6Q4KMQ2 910 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 ANO1Q5XXA6 986 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 CCDC73Q6ZRK6 1079 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 FAM200AQ8TCP9 573 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
LRCH3-202ENST00000414675 MYH6P13533 1939 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 DLEC1Q9Y238 1755 aa17.85■□□□□ 0.45
LRCH3-202ENST00000414675 ADALQ6DHV7 355 aa17.84■□□□□ 0.45
LRCH3-202ENST00000414675 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
LRCH3-202ENST00000414675 FANCBQ8NB91 859 aa17.84■□□□□ 0.45
LRCH3-202ENST00000414675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
LRCH3-202ENST00000414675 SPTLC2O15270 562 aa17.84■□□□□ 0.45
LRCH3-202ENST00000414675 DZIP1Q86YF9 867 aaKnown RBP17.84■□□□□ 0.45
LRCH3-202ENST00000414675 ZSCAN10Q96SZ4 725 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-202ENST00000414675 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
LRCH3-202ENST00000414675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-202ENST00000414675 A0A1B0GVL5 298 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 ST5P78524 1137 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 LUZP1Q86V48 1076 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 FMR1NBQ8N0W7 255 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-202ENST00000414675 CRACR2BQ8N4Y2 399 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-202ENST00000414675 MPNDQ8N594 471 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 KCNG4Q8TDN1 519 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 MRPS27Q92552 414 aaKnown RBP17.83■□□□□ 0.45
LRCH3-202ENST00000414675 CBX8Q9HC52 389 aa17.83■□□□□ 0.45
LRCH3-202ENST00000414675 A0A1W2PQ27 194 aa17.83■□□□□ 0.44
LRCH3-202ENST00000414675 A0A1W2PQ64 194 aa17.83■□□□□ 0.44
LRCH3-202ENST00000414675 A0A1W2PQD8 194 aa17.83■□□□□ 0.44
LRCH3-202ENST00000414675 POLRMTO00411 1230 aaKnown RBP17.83■□□□□ 0.44
LRCH3-202ENST00000414675 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.442e-7■■■■□ 23.5
LRCH3-202ENST00000414675 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
LRCH3-202ENST00000414675 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.83■□□□□ 0.44
LRCH3-202ENST00000414675 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
LRCH3-202ENST00000414675 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
LRCH3-202ENST00000414675 NDUFA8P51970 172 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 RCAN1P53805 252 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 AXDND1Q5T1B0 1012 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 SPTY2D1Q68D10 685 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 KINO60870 393 aaKnown RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 WDHD1O75717 1129 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 UFL1O94874 794 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 LDHBP07195 334 aaKnown RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 TRIM29Q14134 588 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 C15orf52Q6ZUT6 534 aaKnown RBP17.82■□□□□ 0.44
LRCH3-202ENST00000414675 WDR66Q8TBY9 1149 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 DNAJC25Q9H1X3 360 aa17.82■□□□□ 0.44
LRCH3-202ENST00000414675 A0A087WWV3 80 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 NMT2O60551 498 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 PLCB2Q00722 1185 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 ZNF804AQ7Z570 1209 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 ERCC4Q92889 916 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-202ENST00000414675 ORC4O43929 436 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 MARCKSP29966 332 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-202ENST00000414675 SLC39A14Q15043 492 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 PTPAQ15257 358 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 TRIM22Q8IYM9 498 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 SHISA4Q96DD7 197 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
LRCH3-202ENST00000414675 MAP3K14Q99558 947 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 RGS17Q9UGC6 210 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-202ENST00000414675 ZKSCAN5Q9Y2L8 839 aa17.81■□□□□ 0.44
LRCH3-202ENST00000414675 MROH7-TTC4A0A0A0MT08 1334 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 BTBD18B2RXH4 712 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 MMP1P03956 469 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 PCP11498 1178 aaKnown RBP17.8■□□□□ 0.44
LRCH3-202ENST00000414675 GNL2Q13823 731 aaKnown RBP17.8■□□□□ 0.44
LRCH3-202ENST00000414675 SBK1Q52WX2 424 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
LRCH3-202ENST00000414675 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-202ENST00000414675 WASF1Q92558 559 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
LRCH3-202ENST00000414675 ANKRD31Q8N7Z5 1873 aa17.8■□□□□ 0.44
LRCH3-202ENST00000414675 CTAGE5O15320 804 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 DEXIO95424 95 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 PTMAP06454 111 aaKnown RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 FUT2Q10981 343 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 IQCA1Q86XH1 822 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 CD209Q9NNX6 404 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 MCM9Q9NXL9 1143 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 BAZ2BQ9UIF8 2168 aaKnown RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 PLEKHA8P1O95397 391 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 TROAPQ12815 778 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 ZNF827Q17R98 1081 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 DIS3L2Q8IYB7 885 aaKnown RBP17.79■□□□□ 0.44
LRCH3-202ENST00000414675 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
LRCH3-202ENST00000414675 ATP2B4P23634 1241 aa17.78■□□□□ 0.44
LRCH3-202ENST00000414675 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms