RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 UBE2Q2LH0YL09 131 aa36.54■■■■□ 3.44
CSNK1E-206ENST00000413574 DNAJC18Q9H819 358 aa36.54■■■■□ 3.44
CSNK1E-206ENST00000413574 FGAP02671 866 aa36.53■■■■□ 3.44
CSNK1E-206ENST00000413574 DCAF15Q66K64 600 aa36.53■■■■□ 3.44
CSNK1E-206ENST00000413574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP36.53■■■■□ 3.44
CSNK1E-206ENST00000413574 ARPP21Q9UBL0 812 aaPredicted RBP36.53■■■■□ 3.44
CSNK1E-206ENST00000413574 MAP3K10Q02779 954 aa36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 PTH1RQ03431 593 aa36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 CRACR2BQ8N4Y2 399 aaPredicted RBP36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 SBK1Q52WX2 424 aa36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 FOXP4Q8IVH2 680 aaPredicted RBP36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 DYNLL2Q96FJ2 89 aa36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 ZNF341Q9BYN7 854 aa36.52■■■■□ 3.44
CSNK1E-206ENST00000413574 HTRA3P83110 453 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 ALX1Q15699 326 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 ARMC9Q7Z3E5 817 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 AMOTL1Q8IY63 956 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 STK11IPQ8N1F8 1099 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 KLRG1Q96E93 195 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 SERPINB13Q9UIV8 391 aa36.51■■■■□ 3.43
CSNK1E-206ENST00000413574 TBC1D12O60347 775 aa36.5■■■■□ 3.43
CSNK1E-206ENST00000413574 METTL16Q86W50 562 aaKnown RBP36.5■■■■□ 3.43
CSNK1E-206ENST00000413574 DSCC1Q9BVC3 393 aa36.5■■■■□ 3.43
CSNK1E-206ENST00000413574 ZBTB4Q9P1Z0 1013 aaPredicted RBP36.5■■■■□ 3.43
CSNK1E-206ENST00000413574 ABT1Q9ULW3 272 aaKnown RBP36.5■■■■□ 3.43
CSNK1E-206ENST00000413574 FKBP1BP68106 108 aa36.49■■■■□ 3.43
CSNK1E-206ENST00000413574 WRNIP1Q96S55 665 aa36.49■■■■□ 3.43
CSNK1E-206ENST00000413574 EHD4Q9H223 541 aa36.49■■■■□ 3.43
CSNK1E-206ENST00000413574 HERC5Q9UII4 1024 aaKnown RBP36.49■■■■□ 3.43
CSNK1E-206ENST00000413574 SAPCD2Q86UD0 394 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 SLC44A5Q8NCS7 719 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 TRIM34Q9BYJ4 488 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 PHF20L1A8MW92 1017 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 IREB2P48200 963 aaKnown RBP36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 HUNKP57058 714 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 GABPAQ06546 454 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 MAP3K11Q16584 847 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 CREBZFQ9NS37 354 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 TLL2Q9Y6L7 1015 aa36.48■■■■□ 3.43
CSNK1E-206ENST00000413574 MYH8P13535 1937 aa36.47■■■■□ 3.43
CSNK1E-206ENST00000413574 INPP5BP32019 993 aa36.47■■■■□ 3.43
CSNK1E-206ENST00000413574 RRP1BQ14684 758 aaKnown RBP36.47■■■■□ 3.43
CSNK1E-206ENST00000413574 ZKSCAN4Q969J2 545 aaPredicted RBP36.47■■■■□ 3.43
CSNK1E-206ENST00000413574 ZNF112Q9UJU3 913 aa36.46■■■■□ 3.43
CSNK1E-206ENST00000413574 PPARAQ07869 468 aa36.45■■■■□ 3.43
CSNK1E-206ENST00000413574 PPP1R3FQ6ZSY5 799 aaPredicted RBP36.45■■■■□ 3.43
CSNK1E-206ENST00000413574 CLMNQ96JQ2 1002 aa36.45■■■■□ 3.43
CSNK1E-206ENST00000413574 LSG1Q9H089 658 aaKnown RBP36.45■■■■□ 3.43
CSNK1E-206ENST00000413574 ANO2Q9NQ90 1003 aa36.45■■■■□ 3.43
CSNK1E-206ENST00000413574 HSPA6P17066 643 aa36.45■■■■□ 3.42
CSNK1E-206ENST00000413574 HAND2P61296 217 aa36.45■■■■□ 3.42
CSNK1E-206ENST00000413574 LDLRAD1Q5T700 205 aa36.45■■■■□ 3.42
CSNK1E-206ENST00000413574 KIAA1211Q6ZU35 1233 aa36.45■■■■□ 3.42
CSNK1E-206ENST00000413574 ZMYM6O95789 1325 aa36.44■■■■□ 3.42
CSNK1E-206ENST00000413574 SHMT1P34896 483 aa36.44■■■■□ 3.42
CSNK1E-206ENST00000413574 MAP3K9P80192 1104 aa36.44■■■■□ 3.42
CSNK1E-206ENST00000413574 CTDSPL2Q05D32 466 aa36.44■■■■□ 3.42
CSNK1E-206ENST00000413574 LAMA4Q16363 1823 aa36.44■■■■□ 3.42
CSNK1E-206ENST00000413574 ATAD5Q96QE3 1844 aa36.43■■■■□ 3.42
CSNK1E-206ENST00000413574 VGLL4Q14135 290 aa36.42■■■■□ 3.42
CSNK1E-206ENST00000413574 C16orf86Q6ZW13 317 aa36.42■■■■□ 3.42
CSNK1E-206ENST00000413574 MAP4K1Q92918 833 aa36.42■■■■□ 3.42
CSNK1E-206ENST00000413574 CDK8P49336 464 aa36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 SHROOM1Q2M3G4 852 aaPredicted RBP36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 ANKRD13AQ8IZ07 590 aa36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 ROBO3Q96MS0 1386 aa36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 INCENPQ9NQS7 918 aa36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 TATDN1Q6P1N9 297 aa36.41■■■■□ 3.42
CSNK1E-206ENST00000413574 JAG1P78504 1218 aa36.4■■■■□ 3.42
CSNK1E-206ENST00000413574 NBPF3Q9H094 633 aa36.4■■■■□ 3.42
CSNK1E-206ENST00000413574 TACC3Q9Y6A5 838 aa36.4■■■■□ 3.42
CSNK1E-206ENST00000413574 DOCK1Q14185 1865 aa36.4■■■■□ 3.42
CSNK1E-206ENST00000413574 GDF11O95390 407 aa36.39■■■■□ 3.42
CSNK1E-206ENST00000413574 FRMD4AQ9P2Q2 1039 aaPredicted RBP36.39■■■■□ 3.42
CSNK1E-206ENST00000413574 SWAP70Q9UH65 585 aa36.39■■■■□ 3.42
CSNK1E-206ENST00000413574 ELP3Q9H9T3 547 aa36.38■■■■□ 3.41
CSNK1E-206ENST00000413574 CTNNA3Q9UI47 895 aa36.38■■■■□ 3.41
CSNK1E-206ENST00000413574 ANAPC4Q9UJX5 808 aa36.38■■■■□ 3.41
CSNK1E-206ENST00000413574 RBM8AQ9Y5S9 174 aaKnown RBP36.38■■■■□ 3.41
CSNK1E-206ENST00000413574 SNCAIPQ9Y6H5 919 aa36.38■■■■□ 3.41
CSNK1E-206ENST00000413574 PRDM1O75626 825 aa36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CAP2P40123 477 aa36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CSADQ9Y600 493 aa36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 U3KPZ7 1027 aaPredicted RBP36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CEP350Q5VT06 3117 aa36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 ZNF213O14771 459 aa36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CTNND1O60716 968 aaKnown RBP36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CERKLQ49MI3 558 aaPredicted RBP36.37■■■■□ 3.41
CSNK1E-206ENST00000413574 CNKSR2Q8WXI2 1034 aa36.36■■■■□ 3.41
CSNK1E-206ENST00000413574 ZNF157P51786 506 aaPredicted RBP36.35■■■■□ 3.41
CSNK1E-206ENST00000413574 RGMBQ6NW40 437 aa36.35■■■■□ 3.41
CSNK1E-206ENST00000413574 TBC1D10CQ8IV04 446 aa36.35■■■■□ 3.41
CSNK1E-206ENST00000413574 SLC10A4Q96EP9 437 aa36.35■■■■□ 3.41
CSNK1E-206ENST00000413574 MKNK2Q9HBH9 465 aa36.35■■■■□ 3.41
CSNK1E-206ENST00000413574 SLC3A2P08195 630 aaKnown RBP36.34■■■■□ 3.41
CSNK1E-206ENST00000413574 IMMTQ16891 758 aaKnown RBP36.34■■■■□ 3.41
CSNK1E-206ENST00000413574 SCYL3Q8IZE3 742 aa36.34■■■■□ 3.41
CSNK1E-206ENST00000413574 RASSF10A6NK89 507 aa36.34■■■■□ 3.41
CSNK1E-206ENST00000413574 DEFB115Q30KQ5 88 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms