RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 C12orf60Q5U649 245 aa21.7■■□□□ 1.06
PAX3-208ENST00000409828 SAP30BPQ9UHR5 308 aaKnown RBP21.7■■□□□ 1.06
PAX3-208ENST00000409828 SERPINB13Q9UIV8 391 aa21.7■■□□□ 1.06
PAX3-208ENST00000409828 USP17L12C9JPN9 530 aa21.69■■□□□ 1.06
PAX3-208ENST00000409828 USP17L21D6R901 530 aa21.69■■□□□ 1.06
PAX3-208ENST00000409828 GABPAQ06546 454 aa21.69■■□□□ 1.06
PAX3-208ENST00000409828 CCDC129Q6ZRS4 1044 aa21.69■■□□□ 1.06
PAX3-208ENST00000409828 MIGA2Q7L4E1 593 aa21.69■■□□□ 1.06
PAX3-208ENST00000409828 ZNF589Q86UQ0 364 aaPredicted RBP21.69■■□□□ 1.06
PAX3-208ENST00000409828 EPB41L4AQ9HCS5 686 aaPredicted RBP21.69■■□□□ 1.06
PAX3-208ENST00000409828 MYH8P13535 1937 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 PHF20L1A8MW92 1017 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 UBE2Q2LH0YL09 131 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 FOXP2O15409 715 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 APPP05067 770 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 HSPD1P10809 573 aaKnown RBP21.68■■□□□ 1.06
PAX3-208ENST00000409828 PLCD1P51178 756 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 DEFB115Q30KQ5 88 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 RGMBQ6NW40 437 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 CTR9Q6PD62 1173 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.68■■□□□ 1.06
PAX3-208ENST00000409828 GINM1Q9NU53 330 aa21.68■■□□□ 1.06
PAX3-208ENST00000409828 SGSM2O43147 1006 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 CTNND1O60716 968 aaKnown RBP21.67■■□□□ 1.06
PAX3-208ENST00000409828 CDC45O75419 566 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 TDO2P48775 406 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 PRKG1Q13976 671 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 NOL9Q5SY16 702 aaKnown RBP21.67■■□□□ 1.06
PAX3-208ENST00000409828 CASC1Q6TDU7 716 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
PAX3-208ENST00000409828 MOB2Q70IA6 237 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 CRACR2BQ8N4Y2 399 aaPredicted RBP21.67■■□□□ 1.06
PAX3-208ENST00000409828 CCDC102AQ96A19 550 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 WRNIP1Q96S55 665 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 DSCC1Q9BVC3 393 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 NAPBQ9H115 298 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
PAX3-208ENST00000409828 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 VPS53Q5VIR6 699 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 TATDN1Q6P1N9 297 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 TRIM34Q9BYJ4 488 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 CSADQ9Y600 493 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 DOCK1Q14185 1865 aa21.66■■□□□ 1.06
PAX3-208ENST00000409828 ATAD5Q96QE3 1844 aa21.65■■□□□ 1.06
PAX3-208ENST00000409828 ECE1P42892 770 aa21.65■■□□□ 1.06
PAX3-208ENST00000409828 DNAJC18Q9H819 358 aa21.65■■□□□ 1.06
PAX3-208ENST00000409828 FZD1Q9UP38 647 aa21.65■■□□□ 1.06
PAX3-208ENST00000409828 FGAP02671 866 aa21.64■■□□□ 1.05
PAX3-208ENST00000409828 VGLL4Q14135 290 aa21.64■■□□□ 1.05
PAX3-208ENST00000409828 SLC10A4Q96EP9 437 aa21.64■■□□□ 1.05
PAX3-208ENST00000409828 ANAPC4Q9UJX5 808 aa21.64■■□□□ 1.05
PAX3-208ENST00000409828 INPP5BP32019 993 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 CAP2P40123 477 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 ZNF157P51786 506 aaPredicted RBP21.63■■□□□ 1.05
PAX3-208ENST00000409828 C16orf86Q6ZW13 317 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 SCYL3Q8IZE3 742 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 ESYT1Q9BSJ8 1104 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 IL25Q9H293 177 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 ZNF287Q9HBT7 754 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 LAMA4Q16363 1823 aa21.63■■□□□ 1.05
PAX3-208ENST00000409828 SLC3A2P08195 630 aaKnown RBP21.62■■□□□ 1.05
PAX3-208ENST00000409828 SLC10A3P09131 477 aa21.62■■□□□ 1.05
PAX3-208ENST00000409828 ZBTB48P10074 688 aaPredicted RBP21.62■■□□□ 1.05
PAX3-208ENST00000409828 CYP2D6P10635 497 aa21.62■■□□□ 1.05
PAX3-208ENST00000409828 ERO1BQ86YB8 467 aa21.62■■□□□ 1.05
PAX3-208ENST00000409828 CTNNA3Q9UI47 895 aa21.62■■□□□ 1.05
PAX3-208ENST00000409828 SNCAIPQ9Y6H5 919 aa21.62■■□□□ 1.05
PAX3-208ENST00000409828 SPDYE5A6NIY4 337 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 MINDY4BA8MYZ0 360 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 ASNSP08243 561 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 SHMT1P34896 483 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 RASAL3Q86YV0 1011 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 DNAJC5GQ8N7S2 189 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 ZKSCAN4Q969J2 545 aaPredicted RBP21.61■■□□□ 1.05
PAX3-208ENST00000409828 CLMNQ96JQ2 1002 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 TBC1D2Q9BYX2 928 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 THSD7BQ9C0I4 1608 aa21.61■■□□□ 1.05
PAX3-208ENST00000409828 CYP2D7A0A087X1C5 515 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 FAM196BA6NMK8 535 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 FAM155AB1AL88 458 aaPredicted RBP21.6■■□□□ 1.05
PAX3-208ENST00000409828 SLURP2P0DP57 97 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 PCP11498 1178 aaKnown RBP21.6■■□□□ 1.05
PAX3-208ENST00000409828 CDK8P49336 464 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 NT5C2P49902 561 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 HTRA3P83110 453 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 PPATQ06203 517 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 PPARAQ07869 468 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 NOGQ13253 232 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 SLC4A8Q2Y0W8 1093 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 CAPNS2Q96L46 248 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 PICK1Q9NRD5 415 aa21.6■■□□□ 1.05
PAX3-208ENST00000409828 PHIPQ8WWQ0 1821 aa21.59■■□□□ 1.05
PAX3-208ENST00000409828 FGRP09769 529 aa21.59■■□□□ 1.05
PAX3-208ENST00000409828 MAP2K2P36507 400 aa21.59■■□□□ 1.05
PAX3-208ENST00000409828 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
PAX3-208ENST00000409828 KIAA1211Q6ZU35 1233 aa21.59■■□□□ 1.05
PAX3-208ENST00000409828 REM2Q8IYK8 340 aaPredicted RBP21.59■■□□□ 1.05
PAX3-208ENST00000409828 MAP4K1Q92918 833 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms