RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.05
COL6A2-204ENST00000409416 SARM1Q6SZW1 724 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 ZHX3Q9H4I2 956 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.05
COL6A2-204ENST00000409416 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
COL6A2-204ENST00000409416 CDC25BP30305 580 aa15.33■□□□□ 0.04
COL6A2-204ENST00000409416 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
COL6A2-204ENST00000409416 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
COL6A2-204ENST00000409416 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
COL6A2-204ENST00000409416 CCT6AP40227 531 aaKnown RBP15.33■□□□□ 0.04
COL6A2-204ENST00000409416 MB21D2Q8IYB1 491 aaPredicted RBP15.33■□□□□ 0.04
COL6A2-204ENST00000409416 RIPOR2Q9Y4F9 1068 aa15.33■□□□□ 0.04
COL6A2-204ENST00000409416 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
COL6A2-204ENST00000409416 ADKP55263 362 aaKnown RBP15.32■□□□□ 0.04
COL6A2-204ENST00000409416 ERCC6LQ2NKX8 1250 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 PPP1R1BQ9UD71 204 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-204ENST00000409416 MROH7-TTC4A0A0A0MT08 1334 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-204ENST00000409416 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-204ENST00000409416 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
COL6A2-204ENST00000409416 ERICH4A6NGS2 130 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 YEATS4O95619 227 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 RFC4P35249 363 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 NLRP12P59046 1061 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 ARMCX5Q6P1M9 558 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 PIK3AP1Q6ZUJ8 805 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 MNS1Q8NEH6 495 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 C5P01031 1676 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
COL6A2-204ENST00000409416 DMTNQ08495 405 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 NBPF11Q86T75 865 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 JMYQ8N9B5 988 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 NOC3LQ8WTT2 800 aaKnown RBP15.31■□□□□ 0.04
COL6A2-204ENST00000409416 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
COL6A2-204ENST00000409416 TNKSO95271 1327 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 CDKL5O76039 1030 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
COL6A2-204ENST00000409416 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 HEATR3Q7Z4Q2 680 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
COL6A2-204ENST00000409416 DPF2Q92785 391 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
COL6A2-204ENST00000409416 FOXP2O15409 715 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 POLR3EQ9NVU0 708 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 FANCLQ9NW38 375 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 AFDNP55196 1824 aaKnown RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 A0A1W2PQ27 194 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 A0A1W2PQ64 194 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 A0A1W2PQD8 194 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 CIAO1O76071 339 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 ADGRA1Q86SQ6 560 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 PPP1R13BQ96KQ4 1090 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 FKBP15Q5T1M5 1219 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 CERS3Q8IU89 383 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
COL6A2-204ENST00000409416 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 KCNH3Q9ULD8 1083 aa15.3■□□□□ 0.04
COL6A2-204ENST00000409416 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 LRRN4CLQ8ND94 238 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 ZNF622Q969S3 477 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL6A2-204ENST00000409416 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 PPARAQ07869 468 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 FBXO38Q6PIJ6 1188 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 OGFRQ9NZT2 677 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CCNL1Q9UK58 526 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-204ENST00000409416 MST1RQ04912 1400 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CMA1P23946 247 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
COL6A2-204ENST00000409416 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
COL6A2-204ENST00000409416 CLSTN1O94985 981 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms