RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 B4E1Z4 1266 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 ST18O60284 1047 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 CD2BP2O95400 341 aaKnown RBP24.22■■□□□ 1.47
CHKB-201ENST00000406938 HLA-DOAP06340 250 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 PCP11498 1178 aaKnown RBP24.22■■□□□ 1.47
CHKB-201ENST00000406938 HIRAP54198 1017 aaPredicted RBP24.22■■□□□ 1.47
CHKB-201ENST00000406938 ZSCAN29Q8IWY8 852 aaPredicted RBP24.22■■□□□ 1.47
CHKB-201ENST00000406938 NKX2-3Q8TAU0 364 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 TCEANC2Q96MN5 208 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 KRT23Q9C075 422 aa24.22■■□□□ 1.47
CHKB-201ENST00000406938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.22■■□□□ 1.47
CHKB-201ENST00000406938 PRDM1O75626 825 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 FGRP09769 529 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 PDE4BQ07343 736 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 RRP12Q5JTH9 1297 aaKnown RBP24.21■■□□□ 1.47
CHKB-201ENST00000406938 FAM83AQ86UY5 434 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 FAM151AQ8WW52 585 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 TTC14Q96N46 770 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 TNFAIP1Q13829 316 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 C16orf86Q6ZW13 317 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 DHX32Q7L7V1 743 aaKnown RBP24.21■■□□□ 1.47
CHKB-201ENST00000406938 SLC44A5Q8NCS7 719 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 PDRG1Q9NUG6 133 aa24.21■■□□□ 1.47
CHKB-201ENST00000406938 ANGEL2Q5VTE6 544 aaKnown RBP24.2■■□□□ 1.46
CHKB-201ENST00000406938 GGA3Q9NZ52 723 aa24.2■■□□□ 1.46
CHKB-201ENST00000406938 SCAF8Q9UPN6 1271 aaKnown RBP24.2■■□□□ 1.46
CHKB-201ENST00000406938 WDR90Q96KV7 1748 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 SIPA1L1O43166 1804 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 ORC4O43929 436 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 KDM4AO75164 1064 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 TNNI2P48788 182 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 GABPAQ06546 454 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 CHST3Q7LGC8 479 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 TMEM39BQ9GZU3 492 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 EHD4Q9H223 541 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 SERPINB13Q9UIV8 391 aa24.19■■□□□ 1.46
CHKB-201ENST00000406938 MCM5P33992 734 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 ANTXR2P58335 489 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 EXOSC10Q01780 885 aaKnown RBP24.18■■□□□ 1.46
CHKB-201ENST00000406938 CYB5R4Q7L1T6 521 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 IL27Q8NEV9 243 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 ESR2Q92731 530 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 CSRNP1Q96S65 589 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 PI4KBQ9UBF8 816 aa24.18■■□□□ 1.46
CHKB-201ENST00000406938 IQCA1LA6NCM1 817 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 PRC1O43663 620 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 EPHX2P34913 555 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 CDK8P49336 464 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 AK2P54819 239 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 SNX21Q969T3 373 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 LRRC2Q9BYS8 371 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 SCN4AP35499 1836 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 RASA3Q14644 834 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 APOBEC3FQ8IUX4 373 aaKnown RBP24.17■■□□□ 1.46
CHKB-201ENST00000406938 CDAN1Q8IWY9 1227 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 MKNK2Q9HBH9 465 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 ZNF287Q9HBT7 754 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 ZSWIM5Q9P217 1185 aa24.17■■□□□ 1.46
CHKB-201ENST00000406938 WDR19Q8NEZ3 1342 aa24.16■■□□□ 1.46
CHKB-201ENST00000406938 RANBP6O60518 1105 aaKnown RBP24.16■■□□□ 1.46
CHKB-201ENST00000406938 CRACR2BQ8N4Y2 399 aaPredicted RBP24.16■■□□□ 1.46
CHKB-201ENST00000406938 TBC1D2Q9BYX2 928 aa24.16■■□□□ 1.46
CHKB-201ENST00000406938 DNAJC18Q9H819 358 aa24.16■■□□□ 1.46
CHKB-201ENST00000406938 POTECB2RU33 542 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 SLURP2P0DP57 97 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 Q6ZUG5 572 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 USP50Q70EL3 339 aaPredicted RBP24.15■■□□□ 1.46
CHKB-201ENST00000406938 NOL8Q76FK4 1167 aaKnown RBP24.15■■□□□ 1.46
CHKB-201ENST00000406938 HSCBQ8IWL3 235 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 TAF1DQ9H5J8 278 aaPredicted RBP24.15■■□□□ 1.46
CHKB-201ENST00000406938 SWAP70Q9UH65 585 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 PGAP2Q9UHJ9 254 aa24.15■■□□□ 1.46
CHKB-201ENST00000406938 RASA1P20936 1047 aa24.14■■□□□ 1.46
CHKB-201ENST00000406938 TOB2Q14106 344 aaPredicted RBP24.14■■□□□ 1.46
CHKB-201ENST00000406938 DEFB129Q9H1M3 183 aa24.14■■□□□ 1.46
CHKB-201ENST00000406938 ALDH8A1Q9H2A2 487 aaPredicted RBP24.14■■□□□ 1.46
CHKB-201ENST00000406938 PITPNM2Q9BZ72 1349 aa24.14■■□□□ 1.45
CHKB-201ENST00000406938 FAM196BA6NMK8 535 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 FGD1P98174 961 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 FAM47AQ5JRC9 791 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 TRIM34Q9BYJ4 488 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 TSPY2A6NKD2 308 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 SHMT1P34896 483 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 NT5C2P49902 561 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 METTL16Q86W50 562 aaKnown RBP24.13■■□□□ 1.45
CHKB-201ENST00000406938 FOXP4Q8IVH2 680 aaPredicted RBP24.13■■□□□ 1.45
CHKB-201ENST00000406938 TEPSINQ96N21 525 aa24.13■■□□□ 1.45
CHKB-201ENST00000406938 MCM2P49736 904 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 BECN1Q14457 450 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 ANKRD1Q15327 319 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 ZNF444Q8N0Y2 327 aaPredicted RBP24.12■■□□□ 1.45
CHKB-201ENST00000406938 ZKSCAN3Q9BRR0 538 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 LARP6Q9BRS8 491 aaKnown RBP24.12■■□□□ 1.45
CHKB-201ENST00000406938 AGXT2Q9BYV1 514 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 GPHNQ9NQX3 736 aaPredicted RBP24.12■■□□□ 1.45
CHKB-201ENST00000406938 TAOK2Q9UL54 1235 aa24.12■■□□□ 1.45
CHKB-201ENST00000406938 TFAP4Q01664 338 aa24.11■■□□□ 1.45
CHKB-201ENST00000406938 BRF1Q92994 677 aa24.11■■□□□ 1.45
CHKB-201ENST00000406938 TMEM87BQ96K49 555 aa24.11■■□□□ 1.45
CHKB-201ENST00000406938 UBAC1Q9BSL1 405 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms