RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 DDRGK1Q96HY6 314 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 FSD1Q9BTV5 496 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 RNF186Q9NXI6 227 aa25.08■■□□□ 1.61
PDGFA-204ENST00000405692 SAP30BPQ9UHR5 308 aaKnown RBP25.08■■□□□ 1.61
PDGFA-204ENST00000405692 MBD4O95243 580 aa25.07■■□□□ 1.6
PDGFA-204ENST00000405692 GJA5P36382 358 aa25.07■■□□□ 1.6
PDGFA-204ENST00000405692 APPBP2Q92624 585 aa25.07■■□□□ 1.6
PDGFA-204ENST00000405692 ARMT1Q9H993 441 aa25.07■■□□□ 1.6
PDGFA-204ENST00000405692 PRDM10Q9NQV6 1147 aa25.07■■□□□ 1.6
PDGFA-204ENST00000405692 TRPA1O75762 1119 aa25.06■■□□□ 1.6
PDGFA-204ENST00000405692 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
PDGFA-204ENST00000405692 METTL16Q86W50 562 aaKnown RBP25.06■■□□□ 1.6
PDGFA-204ENST00000405692 EVI5LQ96CN4 794 aa25.06■■□□□ 1.6
PDGFA-204ENST00000405692 ATP8A2Q9NTI2 1148 aa25.06■■□□□ 1.6
PDGFA-204ENST00000405692 FOCADQ5VW36 1801 aa25.06■■□□□ 1.6
PDGFA-204ENST00000405692 POLR3DP05423 398 aaPredicted RBP25.05■■□□□ 1.6
PDGFA-204ENST00000405692 LBX1P52954 281 aa25.05■■□□□ 1.6
PDGFA-204ENST00000405692 SNAPC2Q13487 334 aa25.05■■□□□ 1.6
PDGFA-204ENST00000405692 TICAM2Q86XR7 235 aa25.05■■□□□ 1.6
PDGFA-204ENST00000405692 CNKSR2Q8WXI2 1034 aa25.05■■□□□ 1.6
PDGFA-204ENST00000405692 MYH7P12883 1935 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 TESPA1A2RU30 521 aaPredicted RBP25.04■■□□□ 1.6
PDGFA-204ENST00000405692 CETPP11597 493 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 SLFNL1Q499Z3 407 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 IFNL1Q8IU54 200 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 AMOTL1Q8IY63 956 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 PUS7LQ9H0K6 701 aaKnown RBP25.04■■□□□ 1.6
PDGFA-204ENST00000405692 EHD4Q9H223 541 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 OSBPL3Q9H4L5 887 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 MCM9Q9NXL9 1143 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 CDK5RAP2Q96SN8 1893 aa25.04■■□□□ 1.6
PDGFA-204ENST00000405692 IRF6O14896 467 aa25.03■■□□□ 1.6
PDGFA-204ENST00000405692 SDR42E1Q8WUS8 393 aa25.03■■□□□ 1.6
PDGFA-204ENST00000405692 MS4A4AQ96JQ5 239 aa25.03■■□□□ 1.6
PDGFA-204ENST00000405692 TBC1D2Q9BYX2 928 aa25.03■■□□□ 1.6
PDGFA-204ENST00000405692 DCP1AQ9NPI6 582 aaPredicted RBP25.03■■□□□ 1.6
PDGFA-204ENST00000405692 SERPINB13Q9UIV8 391 aa25.03■■□□□ 1.6
PDGFA-204ENST00000405692 CCL15-CCL14A0A0B4J2E2 113 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 FAM196BA6NMK8 535 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 PTPRAP18433 802 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 CAP2P40123 477 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 CCL15Q16663 113 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 PLEKHM2Q8IWE5 1019 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 GINM1Q9NU53 330 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 TAOK2Q9UL54 1235 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 SLC4A4Q9Y6R1 1079 aa25.02■■□□□ 1.6
PDGFA-204ENST00000405692 CXCL11O14625 94 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 CHGBP05060 677 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 CENPBP07199 599 aaPredicted RBP25.01■■□□□ 1.59
PDGFA-204ENST00000405692 SLURP2P0DP57 97 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 GNAT2P19087 354 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 TSKSQ9UJT2 592 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 ZHX2Q9Y6X8 837 aa25.01■■□□□ 1.59
PDGFA-204ENST00000405692 TRIM6-TRIM34B2RNG4 842 aa25■■□□□ 1.59
PDGFA-204ENST00000405692 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
PDGFA-204ENST00000405692 OSBP2Q969R2 916 aa25■■□□□ 1.59
PDGFA-204ENST00000405692 STRBPQ96SI9 672 aaKnown RBP25■■□□□ 1.59
PDGFA-204ENST00000405692 CFHR5Q9BXR6 569 aa25■■□□□ 1.59
PDGFA-204ENST00000405692 KCNH4Q9UQ05 1017 aa25■■□□□ 1.59
PDGFA-204ENST00000405692 PRKAB2O43741 272 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 NEFLP07196 543 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 LAMB1P07942 1786 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 ASNSP08243 561 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 MYH1P12882 1939 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 GIMAP6Q6P9H5 292 aa24.99■■□□□ 1.59
PDGFA-204ENST00000405692 PCNTO95613 3336 aa24.98■■□□□ 1.59
PDGFA-204ENST00000405692 IGF2BP3O00425 579 aaKnown RBP eCLIP24.98■■□□□ 1.59
PDGFA-204ENST00000405692 GPAA1O43292 621 aa24.98■■□□□ 1.59
PDGFA-204ENST00000405692 BRI3BPQ8WY22 251 aa24.98■■□□□ 1.59
PDGFA-204ENST00000405692 DNAJC18Q9H819 358 aa24.98■■□□□ 1.59
PDGFA-204ENST00000405692 AS3MTQ9HBK9 375 aa24.98■■□□□ 1.59
PDGFA-204ENST00000405692 ZCCHC17Q9NP64 241 aaKnown RBP24.98■■□□□ 1.59
PDGFA-204ENST00000405692 PLCD1P51178 756 aa24.97■■□□□ 1.59
PDGFA-204ENST00000405692 ZMYM1Q5SVZ6 1142 aa24.97■■□□□ 1.59
PDGFA-204ENST00000405692 RILPL2Q969X0 211 aa24.97■■□□□ 1.59
PDGFA-204ENST00000405692 AFG3L2Q9Y4W6 797 aa24.97■■□□□ 1.59
PDGFA-204ENST00000405692 DOCK1Q14185 1865 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 USP17L5A8MUK1 530 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 TBC1D8O95759 1140 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 NOM1Q5C9Z4 860 aaKnown RBP24.96■■□□□ 1.59
PDGFA-204ENST00000405692 TATDN1Q6P1N9 297 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 FASTKD5Q7L8L6 764 aaKnown RBP24.96■■□□□ 1.59
PDGFA-204ENST00000405692 PTPN18Q99952 460 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 ARPP21Q9UBL0 812 aaPredicted RBP24.96■■□□□ 1.59
PDGFA-204ENST00000405692 SWAP70Q9UH65 585 aa24.96■■□□□ 1.59
PDGFA-204ENST00000405692 NACAP1Q9BZK3 213 aa24.95■■□□□ 1.58
PDGFA-204ENST00000405692 SIPA1L1O43166 1804 aa24.95■■□□□ 1.58
PDGFA-204ENST00000405692 USP17L12C9JPN9 530 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 USP17L21D6R901 530 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 M0R2C6 588 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 CERKLQ49MI3 558 aaPredicted RBP24.94■■□□□ 1.58
PDGFA-204ENST00000405692 C12orf60Q5U649 245 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 ZNF280CQ8ND82 737 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 CABP5Q9NP86 173 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 HELLSQ9NRZ9 838 aa24.94■■□□□ 1.58
PDGFA-204ENST00000405692 DDX60LQ5H9U9 1706 aaKnown RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 A0A0G2JLL6 359 aaPredicted RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 PATL2C9JE40 543 aaKnown RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 APPP05067 770 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms