RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TM4SF1P30408 202 aa20.69■□□□□ 0.9
CHTOP-205ENST00000403433 SEC23AQ15436 765 aa20.69■□□□□ 0.9
CHTOP-205ENST00000403433 AXDND1Q5T1B0 1012 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-205ENST00000403433 TMED8Q6PL24 325 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-205ENST00000403433 FANCBQ8NB91 859 aa20.69■□□□□ 0.9
CHTOP-205ENST00000403433 CRNKL1Q9BZJ0 848 aaKnown RBP20.69■□□□□ 0.9
CHTOP-205ENST00000403433 TRIM5Q9C035 493 aa20.69■□□□□ 0.9
CHTOP-205ENST00000403433 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
CHTOP-205ENST00000403433 MMP1P03956 469 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 ZNF75DP51815 510 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 CEP57L1Q8IYX8 460 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 ZSCAN10Q96SZ4 725 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 NAT10Q9H0A0 1025 aaKnown RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 CYP2D7A0A087X1C5 515 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 UBE2Q2LH0YL09 131 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 PFKFB1P16118 471 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 IQCB1Q15051 598 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 CRACR2BQ8N4Y2 399 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-205ENST00000403433 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
CHTOP-205ENST00000403433 GUCY1A2P33402 732 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 CTR9Q6PD62 1173 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 IQCA1Q86XH1 822 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 CNBD1Q8NA66 436 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 MAP3K14Q99558 947 aa20.67■□□□□ 0.9
CHTOP-205ENST00000403433 AATFQ9NY61 560 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHTOP-205ENST00000403433 BECN2A8MW95 431 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 WDHD1O75717 1129 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 ZNF202O95125 648 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 PRDX5P30044 214 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 GRAPQ13588 217 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 NFIXQ14938 502 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 PTPAQ15257 358 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 SPTY2D1Q68D10 685 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 DRC7Q8IY82 874 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 ENAHQ8N8S7 591 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 ANKIB1Q9P2G1 1089 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 ZBTB22O15209 634 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 IFIT1BQ5T764 474 aaKnown RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 CATIPQ7Z7H3 387 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 DZIP1Q86YF9 867 aaKnown RBP20.66■□□□□ 0.9
CHTOP-205ENST00000403433 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 ATP8A2Q9NTI2 1148 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 KIAA1468Q9P260 1216 aa20.66■□□□□ 0.9
CHTOP-205ENST00000403433 USP17L12C9JPN9 530 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 USP17L21D6R901 530 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 FGRP09769 529 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 ADRA2BP18089 450 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 AKAP17AQ02040 695 aaKnown RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 DIS3L2Q8IYB7 885 aaKnown RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 FOXP1Q9H334 677 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 AFF2P51816 1311 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 TPM2P07951 284 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 SARM1Q6SZW1 724 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 CMTR1Q8N1G2 835 aaKnown RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 ERCC4Q92889 916 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 RNF26Q9BY78 433 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 DCP1AQ9NPI6 582 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 ARPP21Q9UBL0 812 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-205ENST00000403433 KCNJ14Q9UNX9 436 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 LEMD3Q9Y2U8 911 aa20.65■□□□□ 0.9
CHTOP-205ENST00000403433 BTBD18B2RXH4 712 aa20.64■□□□□ 0.89
CHTOP-205ENST00000403433 PRDM1O75626 825 aa20.64■□□□□ 0.89
CHTOP-205ENST00000403433 SYKP43405 635 aa20.64■□□□□ 0.89
CHTOP-205ENST00000403433 TXNRD3Q86VQ6 643 aa20.64■□□□□ 0.89
CHTOP-205ENST00000403433 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
CHTOP-205ENST00000403433 ANO8Q9HCE9 1232 aaPredicted RBP20.64■□□□□ 0.89
CHTOP-205ENST00000403433 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
CHTOP-205ENST00000403433 UBR3Q6ZT12 1888 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 CUTAO60888 179 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 CALM1P0DP23 149 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 CALM2P0DP24 149 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 CALM3P0DP25 149 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 CDC25BP30305 580 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 DHX40Q8IX18 779 aaKnown RBP20.63■□□□□ 0.89
CHTOP-205ENST00000403433 KCNF1Q9H3M0 494 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.63■□□□□ 0.89
CHTOP-205ENST00000403433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHTOP-205ENST00000403433 R3HCC1Q9Y3T6 440 aaKnown RBP20.63■□□□□ 0.89
CHTOP-205ENST00000403433 A0A087WWV3 80 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 ORC4O43929 436 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 XBP1P17861 261 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 PTGS1P23219 599 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 TERF1P54274 439 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 FBXW7Q969H0 707 aa20.63■□□□□ 0.89
CHTOP-205ENST00000403433 BCL11BQ9C0K0 894 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-205ENST00000403433 JAG2Q9Y219 1238 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms