RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MS4A1P11836 297 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 COL9A1P20849 921 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 ARID4AP29374 1257 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 GJA5P36382 358 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 MECOMQ03112 1051 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 TTC39AQ5SRH9 613 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 THSD4Q6ZMP0 1018 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 DZIP1Q86YF9 867 aaKnown RBP7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 ZFPM1Q8IX07 1006 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 SIRT2Q8IXJ6 389 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 EAF2Q96CJ1 260 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 WNK4Q96J92 1243 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 EPAS1Q99814 870 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 ELP3Q9H9T3 547 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 IL1RAPL2Q9NP60 686 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 GPR108Q9NPR9 543 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 ZBTB40Q9NUA8 1239 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 USP40Q9NVE5 1235 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 FAM198AQ9UFP1 575 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 DBNLQ9UJU6 430 aaKnown RBP7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 DDX19BQ9UMR2 479 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 MYO5AQ9Y4I1 1855 aaKnown RBP7.09□□□□□ -1.28
HMGB1P20-201ENST00000402555 GAKO14976 1311 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 TBC1D8O95759 1140 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 UQCRFS1P1P0C7P4 283 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 SLURP2P0DP57 97 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 BTDP43251 543 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 RGS3P49796 1198 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 VGLL4Q14135 290 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 CCDC158Q5M9N0 1113 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 FKBP1CQ5VVH2 108 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 SPTY2D1Q68D10 685 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 ERICH6Q7L0X2 663 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 MIGA2Q7L4E1 593 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 FAM83AQ86UY5 434 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 AACSQ86V21 672 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZGPATQ8N5A5 531 aaKnown RBP7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 R3HDMLQ9H3Y0 253 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 RAI14Q9P0K7 980 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 RABGEF1Q9UJ41 708 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
HMGB1P20-201ENST00000402555 MROH7-TTC4A0A0A0MT08 1334 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 IGF2BP3O00425 579 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 CYP2E1P05181 493 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 INPP5BP32019 993 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZAP70P43403 619 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 TM4SF4P48230 202 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 SREBF2Q12772 1141 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 PICALMQ13492 652 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 PROX2Q3B8N5 592 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 FAM151AQ8WW52 585 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZKSCAN4Q969J2 545 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 NSUN4Q96CB9 384 aaKnown RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 OPTNQ96CV9 577 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 WRNIP1Q96S55 665 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 DDX4Q9NQI0 724 aaKnown RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 PIH1D3Q9NQM4 214 aaKnown RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 SAGE1Q9NXZ1 904 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 LRP2BPQ9P2M1 347 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 SNCAIPQ9Y6H5 919 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 RFX7Q2KHR2 1363 aa7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 RPAP1Q9BWH6 1393 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P20-201ENST00000402555 GPR75-ASB3A0A0A6YYF3 556 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 DDTLA6NHG4 134 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 MANSC4A6NHS7 340 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 HMMRO75330 724 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 WDHD1O75717 1129 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZBTB48P10074 688 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 PTPN5P54829 565 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 RHBDL3P58872 404 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 DGKZQ13574 1117 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 C6orf132Q5T0Z8 1188 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 ADGRA1Q86SQ6 560 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 ERC1Q8IUD2 1116 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 SLF2Q8IX21 1173 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 RPAP2Q8IXW5 612 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 RHPN1Q8TCX5 695 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 WNT2BQ93097 391 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 PTPN18Q99952 460 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 IDI2Q9BXS1 227 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZNF341Q9BYN7 854 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 MCOLN1Q9GZU1 580 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 CSADQ9Y600 493 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 DOCK2Q92608 1830 aa7.06□□□□□ -1.28
HMGB1P20-201ENST00000402555 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 UNCXA6NJT0 531 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 FAM196BA6NMK8 535 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 GOLGA8CPA6NN73 597 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ENTPD3O75355 529 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 LDHCP07864 332 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 GSTO1P78417 241 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 HSP90AB4PQ58FF6 505 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms