RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 NEDD4P46934 1319 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 ENC1O14682 589 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 FOXP2O15409 715 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 RANBP6O60518 1105 aaKnown RBP10.46□□□□□ -0.74
HPS4-203ENST00000402105 MBD4O95243 580 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 CASP14P31944 242 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 ZNF174Q15697 407 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 TC2NQ8N9U0 490 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.74
HPS4-203ENST00000402105 PLIN2Q99541 437 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.74
HPS4-203ENST00000402105 GUCA1BQ9UMX6 200 aa10.46□□□□□ -0.74
HPS4-203ENST00000402105 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 N4BP3O15049 544 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 CUTAO60888 179 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 ZFYP08048 801 aaPredicted RBP10.45□□□□□ -0.74
HPS4-203ENST00000402105 PHKA1P46020 1223 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 SLF1Q9BQI6 1058 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 CSRNP2Q9H175 543 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 VPS54Q9P1Q0 977 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 LCMT1Q9UIC8 334 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 TFR2Q9UP52 801 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 ZRANB2O95218 330 aaKnown RBP eCLIP10.45□□□□□ -0.74
HPS4-203ENST00000402105 ABL1P00519 1130 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 CASP7P55210 303 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 RESP18Q5W5W9 173 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 NOSTRINQ8IVI9 506 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 H3BQF6 201 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 ITGA6P23229 1130 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 RTN1Q16799 776 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 MFSD6Q6ZSS7 791 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
HPS4-203ENST00000402105 SLC35F6Q8N357 371 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 GREM2Q9H772 168 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 DACH1Q9UI36 760 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 TUBE1Q9UJT0 475 aa10.45□□□□□ -0.74
HPS4-203ENST00000402105 UBN2Q6ZU65 1347 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 HSPA2P54652 639 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 MRPS25P82663 173 aaKnown RBP10.44□□□□□ -0.74
HPS4-203ENST00000402105 PTPAQ15257 358 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 RAD9BQ6WBX8 426 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 GOLGA6L1Q8N7Z2 621 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 CTNND2Q9UQB3 1225 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 FAN1Q9Y2M0 1017 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 MRFAP1Q9Y605 127 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 SH2B2O14492 632 aaPredicted RBP10.44□□□□□ -0.74
HPS4-203ENST00000402105 STX10O60499 249 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 TXLNAP40222 546 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 WTAPQ15007 396 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 NCAPH2Q6IBW4 605 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 UBAC1Q9BSL1 405 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 ABCB6Q9NP58 842 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 TAB2Q9NYJ8 693 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 JCADQ9P266 1359 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 DHX8Q14562 1220 aaKnown RBP10.44□□□□□ -0.74
HPS4-203ENST00000402105 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 KIF6Q6ZMV9 814 aa10.44□□□□□ -0.74
HPS4-203ENST00000402105 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
HPS4-203ENST00000402105 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 CTAGE9A4FU28 777 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 PPP6R2O75170 966 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 ERCC3P19447 782 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
HPS4-203ENST00000402105 CWC15Q9P013 229 aaKnown RBP10.43□□□□□ -0.74
HPS4-203ENST00000402105 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 FMN2Q9NZ56 1722 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 MATR3P43243 847 aaKnown RBP eCLIP10.43□□□□□ -0.74
HPS4-203ENST00000402105 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
HPS4-203ENST00000402105 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 PNKPQ96T60 521 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 MAP3K14Q99558 947 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 FUT8Q9BYC5 575 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 TRIM10Q9UDY6 481 aa10.43□□□□□ -0.74
HPS4-203ENST00000402105 GOLGA6L9A6NEM1 432 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 ERLIN1O75477 346 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 TUBB4AP04350 444 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 PDE6AP16499 860 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 RABGGTAQ92696 567 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 NCAPD2Q15021 1401 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 AGLP35573 1532 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 CTAGE15A4D2H0 777 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 CTAGE8P0CG41 777 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 ATF3P18847 181 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 DNA2P51530 1060 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 FOXR1Q6PIV2 292 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 LRP10Q7Z4F1 713 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 CTAGE6Q86UF2 777 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 CTAGE4Q8IX94 777 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 MLKLQ8NB16 471 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 HPSEQ9Y251 543 aa10.42□□□□□ -0.74
HPS4-203ENST00000402105 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms