RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNED1-204ENST00000401884 ZMYM6O95789 1325 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 USP17L12C9JPN9 530 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 USP17L21D6R901 530 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 TMEM87AQ8NBN3 555 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 A0A1W2PQ27 194 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 A0A1W2PQ64 194 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 A0A1W2PQD8 194 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 RHOXF2BP0C7M4 288 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 PPARAQ07869 468 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 ERMNQ8TAM6 284 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 RHOXF2Q9BQY4 288 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 A0A087WWV3 80 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 RBM6P78332 1123 aaKnown RBP19.96■□□□□ 0.79
SNED1-204ENST00000401884 TBC1D8BQ0IIM8 1120 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 TTC14Q96N46 770 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 CLIC6Q96NY7 704 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 SYNRGQ9UMZ2 1314 aa19.96■□□□□ 0.79
SNED1-204ENST00000401884 TBCAO75347 108 aaKnown RBP19.95■□□□□ 0.78
SNED1-204ENST00000401884 SDR42E1Q8WUS8 393 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 CETN1Q12798 172 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 TEX11Q8IYF3 940 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 FERMT2Q96AC1 680 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 PLCD1P51178 756 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 APOA5Q6Q788 366 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 SAP30BPQ9UHR5 308 aaKnown RBP19.95■□□□□ 0.78
SNED1-204ENST00000401884 CYP27B1O15528 508 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 PARP1P09874 1014 aaKnown RBP19.95■□□□□ 0.78
SNED1-204ENST00000401884 CARMIL3Q8ND23 1372 aa19.95■□□□□ 0.78
SNED1-204ENST00000401884 SSR1P43307 286 aaKnown RBP19.94■□□□□ 0.78
SNED1-204ENST00000401884 ARID5AQ03989 594 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 GTPBP4Q9BZE4 634 aaKnown RBP19.94■□□□□ 0.78
SNED1-204ENST00000401884 USP8P40818 1118 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 PPP2R3AQ06190 1150 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 PRPF4BQ13523 1007 aaKnown RBP19.94■□□□□ 0.78
SNED1-204ENST00000401884 CCDC122Q5T0U0 273 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 KIAA1524Q8TCG1 905 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 CAPZA3Q96KX2 299 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 KRT9P35527 623 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 SPECC1LQ69YQ0 1117 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 ATG3Q9NT62 314 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
SNED1-204ENST00000401884 GYG1P46976 350 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 TUBB4BP68371 445 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 ZBTB1Q9Y2K1 713 aa19.94■□□□□ 0.78
SNED1-204ENST00000401884 M0R2C6 588 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 RESTQ13127 1097 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 SLC39A14Q15043 492 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 CARD10Q9BWT7 1032 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 CRB1P82279 1406 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 TOM1O60784 492 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 TNKSO95271 1327 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 NEFHP12036 1026 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 RPS8P62241 208 aaKnown RBP19.93■□□□□ 0.78
SNED1-204ENST00000401884 IFFO1Q0D2I5 559 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 SYCP3Q8IZU3 236 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 CACTINQ8WUQ7 758 aaKnown RBP19.93■□□□□ 0.78
SNED1-204ENST00000401884 FANCLQ9NW38 375 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 PCDHA5Q9Y5H7 936 aa19.93■□□□□ 0.78
SNED1-204ENST00000401884 H7C1W4 665 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 PDE4DQ08499 809 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 PAK1Q13153 545 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 PUS7LQ9H0K6 701 aaKnown RBP19.92■□□□□ 0.78
SNED1-204ENST00000401884 STXBP4Q6ZWJ1 553 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 HEG1Q9ULI3 1381 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 PHACTR2O75167 634 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 TFAP4Q01664 338 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 TOB2Q14106 344 aaPredicted RBP19.92■□□□□ 0.78
SNED1-204ENST00000401884 C11orf57Q6ZUT1 292 aaPredicted RBP19.92■□□□□ 0.78
SNED1-204ENST00000401884 LINC00301Q8NCQ3 95 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 POLR3EQ9NVU0 708 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 ZNF215Q9UL58 517 aaPredicted RBP19.92■□□□□ 0.78
SNED1-204ENST00000401884 DPCR1Q3MIW9 517 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 SLFNL1Q499Z3 407 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 KRBA2Q6ZNG9 492 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 WDR66Q8TBY9 1149 aa19.92■□□□□ 0.78
SNED1-204ENST00000401884 GPHNQ9NQX3 736 aaPredicted RBP19.92■□□□□ 0.78
SNED1-204ENST00000401884 BCCIPQ9P287 314 aaKnown RBP eCLIP19.92■□□□□ 0.78
SNED1-204ENST00000401884 ADKP55263 362 aaKnown RBP19.91■□□□□ 0.78
SNED1-204ENST00000401884 CSGALNACT2Q8N6G5 542 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 EHMT1Q9H9B1 1298 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 WDR17Q8IZU2 1322 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 CNBD1Q8NA66 436 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 NEK11Q8NG66 645 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 TAB2Q9NYJ8 693 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 SAMM50Q9Y512 469 aa19.91■□□□□ 0.78
SNED1-204ENST00000401884 RIMBP2O15034 1052 aa19.9■□□□□ 0.78
SNED1-204ENST00000401884 SV2BQ7L1I2 683 aa19.9■□□□□ 0.78
SNED1-204ENST00000401884 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
SNED1-204ENST00000401884 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
SNED1-204ENST00000401884 TUBBP07437 444 aa19.9■□□□□ 0.78
SNED1-204ENST00000401884 NOC4LQ9BVI4 516 aaKnown RBP19.9■□□□□ 0.78
SNED1-204ENST00000401884 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
SNED1-204ENST00000401884 ETF1P62495 437 aaKnown RBP19.9■□□□□ 0.78
SNED1-204ENST00000401884 CCDC113Q9H0I3 377 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 525 ms