RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 IFT81Q8WYA0 676 aa20.39■□□□□ 0.86
COL18A1-204ENST00000400337 ARID4AP29374 1257 aaPredicted RBP20.39■□□□□ 0.85
COL18A1-204ENST00000400337 TERF1P54274 439 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 STAMBPO95630 424 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 NLRP12P59046 1061 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 CCDC77Q9BR77 488 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 GLT8D2Q9H1C3 349 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 ATP2C2O75185 946 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 ZNF75DP51815 510 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.85
COL18A1-204ENST00000400337 UIMC1Q96RL1 719 aa20.39■□□□□ 0.85
COL18A1-204ENST00000400337 PAIP2Q9BPZ3 127 aaKnown RBP20.39■□□□□ 0.85
COL18A1-204ENST00000400337 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 USP21Q9UK80 565 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 USP17L12C9JPN9 530 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 USP17L21D6R901 530 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 NCAPH2Q6IBW4 605 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 MYOM2P54296 1465 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 TSNARE1Q96NA8 513 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 NFE2L3Q9Y4A8 694 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 HARSP12081 509 aaKnown RBP20.38■□□□□ 0.85
COL18A1-204ENST00000400337 GYG1P46976 350 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 ERVK-7P63135 1459 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 POSTNQ15063 836 aa20.38■□□□□ 0.85
COL18A1-204ENST00000400337 STAMQ92783 540 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 CCDC169A6NNP5 214 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 PROSER3Q2NL68 480 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 HAUS7Q99871 368 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 CEP83Q9Y592 693 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 HSPD1P10809 573 aaKnown RBP20.37■□□□□ 0.85
COL18A1-204ENST00000400337 TUBB4BP68371 445 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 BIRC3Q13489 604 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 ZNF654Q8IZM8 581 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 ATRIPQ8WXE1 791 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 LZTS2Q9BRK4 669 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 IQCGQ9H095 443 aaKnown RBP20.37■□□□□ 0.85
COL18A1-204ENST00000400337 AATKQ6ZMQ8 1374 aa20.37■□□□□ 0.85
COL18A1-204ENST00000400337 TRIM14Q14142 442 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 USH1GQ495M9 461 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 DYMQ7RTS9 669 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 PDE6AP16499 860 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 BCAMP50895 628 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 VAV2P52735 878 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 ZNF354CQ86Y25 554 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 PSMD1Q99460 953 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 ATP2A1O14983 1001 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 PCCAP05165 728 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-204ENST00000400337 IFNL3Q8IZI9 196 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 CMTR1Q8N1G2 835 aaKnown RBP20.36■□□□□ 0.85
COL18A1-204ENST00000400337 TMEM63CQ9P1W3 806 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 TPCN1Q9ULQ1 816 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 CETN3O15182 167 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 MYSM1Q5VVJ2 828 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 ZNF274Q96GC6 653 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-204ENST00000400337 FNBP1Q96RU3 617 aa20.36■□□□□ 0.85
COL18A1-204ENST00000400337 HERC4Q5GLZ8 1057 aaPredicted RBP20.35■□□□□ 0.85
COL18A1-204ENST00000400337 ARPP21Q9UBL0 812 aaPredicted RBP20.35■□□□□ 0.85
COL18A1-204ENST00000400337 CALCRLQ16602 461 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 TRMT2AQ8IZ69 625 aaKnown RBP20.35■□□□□ 0.85
COL18A1-204ENST00000400337 SMTNP53814 917 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 TNNC1P63316 161 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 GTF2IP78347 998 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 CYP26C1Q6V0L0 522 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 CPXCR1Q8N123 301 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 SDR42E1Q8WUS8 393 aa20.35■□□□□ 0.85
COL18A1-204ENST00000400337 ARHGEF35A5YM69 484 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 MYCLP12524 364 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-204ENST00000400337 KRT5P13647 590 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 ZSWIM6Q9HCJ5 1215 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 TAB2Q9NYJ8 693 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 DDX39AO00148 427 aaKnown RBP20.34■□□□□ 0.85
COL18A1-204ENST00000400337 ERCC3P19447 782 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 FMNL3Q8IVF7 1028 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 TMOD4Q9NZQ9 345 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 EVCP57679 992 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 MAEAQ7L5Y9 396 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 C17orf53Q8N3J3 647 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-204ENST00000400337 BLZF1Q9H2G9 400 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 TBC1D7Q9P0N9 293 aa20.34■□□□□ 0.85
COL18A1-204ENST00000400337 RAD51AP2Q09MP3 1159 aa20.33■□□□□ 0.85
COL18A1-204ENST00000400337 RSPH14Q9UHP6 348 aa20.33■□□□□ 0.85
COL18A1-204ENST00000400337 SMIM23A6NLE4 172 aa20.33■□□□□ 0.85
COL18A1-204ENST00000400337 CABP7Q86V35 215 aa20.33■□□□□ 0.85
COL18A1-204ENST00000400337 REXO1Q8N1G1 1221 aaKnown RBP20.33■□□□□ 0.85
COL18A1-204ENST00000400337 MSANTD4Q8NCY6 345 aa20.33■□□□□ 0.85
COL18A1-204ENST00000400337 KIF4AO95239 1232 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 FGAP02671 866 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 ADD1P35611 737 aaKnown RBP20.33■□□□□ 0.84
COL18A1-204ENST00000400337 VWA3BQ502W6 1294 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 WDR44Q5JSH3 913 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 TRMT44Q8IYL2 757 aaKnown RBP20.33■□□□□ 0.84
COL18A1-204ENST00000400337 CALUO43852 315 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms