RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RNF216Q9NWF9 866 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 MAGEC2Q9UBF1 373 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 TNKSO95271 1327 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 ADRA2BP18089 450 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 SOGA3Q5TF21 947 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 FANCBQ8NB91 859 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 KAT14Q9H8E8 782 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 PPP6R2O75170 966 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 RASGRF1Q13972 1273 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 DDB1Q16531 1140 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF569Q5MCW4 686 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 ARMCX5Q6P1M9 558 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 IQCA1Q86XH1 822 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CSRNP2Q9H175 543 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 SAMSN1Q9NSI8 373 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 VWA3AA6NCI4 1184 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 N4BP3O15049 544 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 TSR1Q2NL82 804 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CDC5LQ99459 802 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 PALLDQ8WX93 1383 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 POLR2DO15514 142 aaKnown RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 SAMD1Q6SPF0 538 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 NOSTRINQ8IVI9 506 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 BAG1Q99933 345 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-202ENST00000398417 MKNK2Q9HBH9 465 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 POLR3EQ9NVU0 708 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 PPP2R2CQ9Y2T4 447 aa5.62□□□□□ -1.51
SMAD4-202ENST00000398417 CARD10Q9BWT7 1032 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 CYP2D6P10635 497 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 NOM1Q5C9Z4 860 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 RBM43Q6ZSC3 357 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 PLEKHA8P1O95397 391 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 ERFEQ4G0M1 354 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 ARHGAP29Q52LW3 1261 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 DZIP1Q86YF9 867 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF444Q8N0Y2 327 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 NUP88Q99567 741 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 SOS2Q07890 1332 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC194A0A1B0GVG4 234 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 EVCP57679 992 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 KRT222Q8N1A0 295 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 TSPYL1Q9H0U9 437 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 BCCIPQ9P287 314 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 USP17L12C9JPN9 530 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 USP17L21D6R901 530 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 GRIN1Q05586 938 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 POSTNQ15063 836 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 RIPOR2Q9Y4F9 1068 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 SSBP05455 408 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 CAGE1Q8TC20 777 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 GPR101Q96P66 508 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 MROH5Q6ZUA9 1318 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 MEGF6O75095 1541 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 GOLGA8HP0CJ92 632 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 EIF5P55010 431 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 NAP1L1P55209 391 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 RILPL1Q5EBL4 403 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 LRP10Q7Z4F1 713 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 HEATR3Q7Z4Q2 680 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 SMYD4Q8IYR2 804 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 CRNKL1Q9BZJ0 848 aaKnown RBP5.61□□□□□ -1.51
SMAD4-202ENST00000398417 RTL9Q8NET4 1388 aa5.61□□□□□ -1.51
SMAD4-202ENST00000398417 GSG1L2A8MUP6 293 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 GNAT2P19087 354 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 HIBADHP31937 336 aaKnown RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 CCT6AP40227 531 aaKnown RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 FAM193AP78312 1265 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 SKIDA1Q1XH10 827 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 TMTC2Q8N394 836 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 IMPACTQ9P2X3 320 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 KIAA1210Q9ULL0 1709 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 SMIM22K7EJ46 135 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 CRKLP46109 303 aaKnown RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 ATP2B2Q01814 1243 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 NKX2-3Q8TAU0 364 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 RFX7Q2KHR2 1363 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 DIP2BQ9P265 1576 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 TXLNAP40222 546 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 EPSTI1Q96J88 318 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 DIP2AQ14689 1571 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 ARHGAP23Q9P227 1491 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 CDC25AP30304 524 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 MLKLQ8NB16 471 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 GPKOWQ92917 476 aaPredicted RBP eCLIP5.6□□□□□ -1.515e-7■■■□□ 17.4
SMAD4-202ENST00000398417 MMP1P03956 469 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 RHOXF2BP0C7M4 288 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 RBL2Q08999 1139 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 CRACR2BQ8N4Y2 399 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 FEZ1Q99689 392 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 RHOXF2Q9BQY4 288 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 GTPBP4Q9BZE4 634 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms