RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GNAI2P04899 355 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 SIM2Q14190 667 aaPredicted RBP7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 TBC1D25Q3MII6 688 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 LRSAM1Q6UWE0 723 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 ARL6IP6Q8N6S5 226 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 RSRC1Q96IZ7 334 aaKnown RBP7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 SLC7A5P2Q9GIP4 190 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 TMX1Q9H3N1 280 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 DDX56Q9NY93 547 aaKnown RBP7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 SPATA7Q9P0W8 599 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 POLG2Q9UHN1 485 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 ATP8A1Q9Y2Q0 1164 aa7.52□□□□□ -1.2
TM9SF4-202ENST00000398022 DOT1LQ8TEK3 1739 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 GNAI3P08754 354 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 TOMM20Q15388 145 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SLC5A9Q2M3M2 681 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 C10orf62Q5T681 223 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 MAK16Q9BXY0 300 aaKnown RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 AVENQ9NQS1 362 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 FAM25EA8MYX2 175 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 RBBP5Q15291 538 aaKnown RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 TTLL5Q6EMB2 1281 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 PDXDC1Q6P996 788 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SASS6Q6UVJ0 657 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 MEIS3Q99687 375 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 BRINP2Q9C0B6 783 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SPDYE4A6NLX3 237 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 RPS6KA3P51812 740 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 PDE1AP54750 535 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 CCDC80Q76M96 950 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 SEPT12Q8IYM1 358 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 TTC14Q96N46 770 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 OSBPL3Q9H4L5 887 aa7.52□□□□□ -1.21
TM9SF4-202ENST00000398022 MTRF1O75570 445 aaKnown RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ESCO1Q5FWF5 840 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 AKNAD1Q5T1N1 836 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 RNF187Q5TA31 235 aaPredicted RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ZGPATQ8N5A5 531 aaKnown RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 LRRCC1Q9C099 1032 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ANO2Q9NQ90 1003 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 XPO7Q9UIA9 1087 aaKnown RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 TSPYL4Q9UJ04 414 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ATP10DQ9P241 1426 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 AK9Q5TCS8 1911 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 SEPT7Q16181 437 aaKnown RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 PPM1EQ8WY54 764 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 INTS4Q96HW7 963 aaKnown RBP7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 TMX3Q96JJ7 454 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 PKD1L3Q7Z443 1732 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 TTC21BQ7Z4L5 1316 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 SYCE3A1L190 88 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 TSPAN7P41732 249 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 PDIA5Q14554 519 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 DBN1Q16643 649 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 CABLES1Q8TDN4 633 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 TSPY26PQ9H489 355 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ATP6V0A2Q9Y487 856 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 C5P01031 1676 aa7.51□□□□□ -1.21
TM9SF4-202ENST00000398022 ZNF831Q5JPB2 1677 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 RAD51AP2Q09MP3 1159 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 EIF4A2Q14240 407 aaKnown RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 ATP2B3Q16720 1220 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 MCM10Q7L590 875 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 SLC43A3Q8NBI5 491 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 HDAC7Q8WUI4 952 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 CLIC5Q9NZA1 410 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 CICQ96RK0 1608 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 IFRD1O00458 451 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 MX1P20591 662 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 SFMBT2Q5VUG0 894 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 KRT28Q7Z3Y7 464 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 TMEM110Q86TL2 294 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 RILPL2Q969X0 211 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 PDLIM2Q96JY6 352 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 DIAPH3Q9NSV4 1193 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 ADAMTS7Q9UKP4 1686 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 WDR33Q9C0J8 1336 aaKnown RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 FMNL1O95466 1100 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 RPN1P04843 607 aaKnown RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 PKP1Q13835 747 aa7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 NAIF1Q69YI7 327 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 PRPF38AQ8NAV1 312 aaKnown RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 N4BP2L2Q92802 583 aaPredicted RBP7.5□□□□□ -1.21
TM9SF4-202ENST00000398022 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms