RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DHX40Q8IX18 779 aaKnown RBP11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 ENGASEQ8NFI3 743 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 SMARCE1Q969G3 411 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 GNAT2P19087 354 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 PRDX5P30044 214 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 MCM7P33993 719 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 RFC4P35249 363 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 EVX2Q03828 476 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
CPSF1P1-201ENST00000397477 G3V3G9 751 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 ARID4AP29374 1257 aaPredicted RBP11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 HIBADHP31937 336 aaKnown RBP11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 NLRP12P59046 1061 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 TBC1D9BQ66K14 1250 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 CDC25AP30304 524 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 SHC4Q6S5L8 630 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 CCNL1Q9UK58 526 aaPredicted RBP11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 USP49Q70CQ1 688 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 AMOTL1Q8IY63 956 aa11.97□□□□□ -0.49
CPSF1P1-201ENST00000397477 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 TRIM75PA6NK02 468 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 DEXIO95424 95 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 SYT10Q6XYQ8 523 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 PIK3AP1Q6ZUJ8 805 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 SMARCC1Q92922 1105 aaPredicted RBP11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 CRNKL1Q9BZJ0 848 aaKnown RBP11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 TPTE2Q6XPS3 522 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.49
CPSF1P1-201ENST00000397477 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.5
CPSF1P1-201ENST00000397477 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.5
CPSF1P1-201ENST00000397477 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.5
CPSF1P1-201ENST00000397477 UIMC1Q96RL1 719 aa11.96□□□□□ -0.5
CPSF1P1-201ENST00000397477 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.5
CPSF1P1-201ENST00000397477 JCADQ9P266 1359 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 MYL5Q02045 173 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 EEF2KMTQ96G04 330 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 BLZF1Q9H2G9 400 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 URI1O94763 535 aaPredicted RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 NTSR2O95665 410 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 ZSCAN10Q96SZ4 725 aaPredicted RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 KAT14Q9H8E8 782 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 TCRBV5S4A2TA0A5A2 114 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 USP17L8P0C7I0 530 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 AXDND1Q5T1B0 1012 aaPredicted RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 CRACR2BQ8N4Y2 399 aaPredicted RBP11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 EPSTI1Q96J88 318 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 CSRNP2Q9H175 543 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 CPVLQ9H3G5 476 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 ZSWIM4Q9H7M6 989 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
CPSF1P1-201ENST00000397477 BCL9O00512 1426 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 CUTAO60888 179 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 FMNL1O95466 1100 aaPredicted RBP11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 IFNAR1P17181 557 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 FGFR2P21802 821 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 KRT2P35908 639 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 KRBA2Q6ZNG9 492 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MAPKAPK5Q8IW41 473 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MMP1P03956 469 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 GSDMDP57764 484 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MECOMQ03112 1051 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 RILPL1Q5EBL4 403 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 DPF2Q92785 391 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 FAM84BQ96KN1 310 aaPredicted RBP11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 AK7Q96M32 723 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 CEP131Q9UPN4 1083 aa11.94□□□□□ -0.5
CPSF1P1-201ENST00000397477 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms