RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 MAGEB6P1A0A0J9YX57 407 aa21.2■□□□□ 0.98
UPK3A-202ENST00000396082 HLA-DOAP06340 250 aa21.2■□□□□ 0.98
UPK3A-202ENST00000396082 FAM43AQ8N2R8 423 aa21.2■□□□□ 0.98
UPK3A-202ENST00000396082 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
UPK3A-202ENST00000396082 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.2■□□□□ 0.98
UPK3A-202ENST00000396082 SAP30BPQ9UHR5 308 aaKnown RBP21.2■□□□□ 0.98
UPK3A-202ENST00000396082 HERC5Q9UII4 1024 aaKnown RBP21.2■□□□□ 0.98
UPK3A-202ENST00000396082 ZHX2Q9Y6X8 837 aa21.2■□□□□ 0.98
UPK3A-202ENST00000396082 ZNF532Q9HCE3 1301 aa21.2■□□□□ 0.98
UPK3A-202ENST00000396082 MYH1P12882 1939 aa21.19■□□□□ 0.98
UPK3A-202ENST00000396082 ZFYVE28Q9HCC9 887 aa21.19■□□□□ 0.98
UPK3A-202ENST00000396082 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
UPK3A-202ENST00000396082 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 MYH7P12883 1935 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 PTPRAP18433 802 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 SLC4A8Q2Y0W8 1093 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 KCNH4Q9UQ05 1017 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
UPK3A-202ENST00000396082 BTBD19C9JJ37 291 aa21.17■□□□□ 0.98
UPK3A-202ENST00000396082 RIOK1Q9BRS2 568 aaKnown RBP21.17■□□□□ 0.98
UPK3A-202ENST00000396082 CRNKL1Q9BZJ0 848 aaKnown RBP21.17■□□□□ 0.98
UPK3A-202ENST00000396082 ZCCHC17Q9NP64 241 aaKnown RBP21.17■□□□□ 0.98
UPK3A-202ENST00000396082 NAV1Q8NEY1 1877 aa21.16■□□□□ 0.98
UPK3A-202ENST00000396082 CXCL11O14625 94 aa21.16■□□□□ 0.98
UPK3A-202ENST00000396082 AAMPQ13685 434 aa21.16■□□□□ 0.98
UPK3A-202ENST00000396082 FOXP4Q8IVH2 680 aaPredicted RBP21.16■□□□□ 0.98
UPK3A-202ENST00000396082 ADD2P35612 726 aa21.15■□□□□ 0.98
UPK3A-202ENST00000396082 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
UPK3A-202ENST00000396082 ZSCAN25Q6NSZ9 544 aa21.15■□□□□ 0.98
UPK3A-202ENST00000396082 ERO1AQ96HE7 468 aa21.15■□□□□ 0.98
UPK3A-202ENST00000396082 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.15■□□□□ 0.98
UPK3A-202ENST00000396082 TCRBV5S4A2TA0A5A2 114 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 TRIM75PA6NK02 468 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 CAP2P40123 477 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 ANKRD23Q86SG2 305 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 CCDC84Q86UT8 332 aaPredicted RBP21.14■□□□□ 0.97
UPK3A-202ENST00000396082 AFG3L2Q9Y4W6 797 aa21.14■□□□□ 0.97
UPK3A-202ENST00000396082 PHIPQ8WWQ0 1821 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 PDHXO00330 501 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 SP3Q02447 781 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 PKN2Q16513 984 aaKnown RBP21.13■□□□□ 0.97
UPK3A-202ENST00000396082 GADL1Q6ZQY3 521 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 FASTKD5Q7L8L6 764 aaKnown RBP21.13■□□□□ 0.97
UPK3A-202ENST00000396082 TTC6Q86TZ1 520 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 LCORLQ8N3X6 602 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 GCC1Q96CN9 775 aa21.13■□□□□ 0.97
UPK3A-202ENST00000396082 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
UPK3A-202ENST00000396082 PTPRFP10586 1907 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 TTC41PQ6P2S7 1318 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 A0A0G2JLL6 359 aaPredicted RBP21.12■□□□□ 0.97
UPK3A-202ENST00000396082 ERC2O15083 957 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 MBD4O95243 580 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 POLR3DP05423 398 aaPredicted RBP21.12■□□□□ 0.97
UPK3A-202ENST00000396082 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
UPK3A-202ENST00000396082 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 PRRT2Q7Z6L0 340 aaPredicted RBP21.12■□□□□ 0.97
UPK3A-202ENST00000396082 DNAJC18Q9H819 358 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 ARMT1Q9H993 441 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 AS3MTQ9HBK9 375 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 TRIM17Q9Y577 477 aa21.12■□□□□ 0.97
UPK3A-202ENST00000396082 ASNSP08243 561 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 RRP1BQ14684 758 aaKnown RBP21.11■□□□□ 0.97
UPK3A-202ENST00000396082 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 SLFNL1Q499Z3 407 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 CD99L2Q8TCZ2 262 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 TBC1D2Q9BYX2 928 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 MCM9Q9NXL9 1143 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
UPK3A-202ENST00000396082 DDX60LQ5H9U9 1706 aaKnown RBP21.1■□□□□ 0.97
UPK3A-202ENST00000396082 USP17L5A8MUK1 530 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 TLR2O60603 784 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 GDF11O95390 407 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 SPP2Q13103 211 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
UPK3A-202ENST00000396082 ZNF280CQ8ND82 737 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 EXOC6Q8TAG9 804 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 PARK7Q99497 189 aaKnown RBP21.1■□□□□ 0.97
UPK3A-202ENST00000396082 EHD4Q9H223 541 aa21.1■□□□□ 0.97
UPK3A-202ENST00000396082 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
UPK3A-202ENST00000396082 MX1P20591 662 aa21.09■□□□□ 0.97
UPK3A-202ENST00000396082 MOGSQ13724 837 aa21.09■□□□□ 0.97
UPK3A-202ENST00000396082 KBTBD3Q8NAB2 608 aa21.09■□□□□ 0.97
UPK3A-202ENST00000396082 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
UPK3A-202ENST00000396082 DDRGK1Q96HY6 314 aa21.09■□□□□ 0.97
UPK3A-202ENST00000396082 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
UPK3A-202ENST00000396082 CHGBP05060 677 aa21.08■□□□□ 0.97
UPK3A-202ENST00000396082 KIF22Q14807 665 aa21.08■□□□□ 0.97
UPK3A-202ENST00000396082 ARHGEF6Q15052 776 aa21.08■□□□□ 0.97
UPK3A-202ENST00000396082 FBXO46Q6PJ61 603 aaPredicted RBP21.08■□□□□ 0.97
UPK3A-202ENST00000396082 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
UPK3A-202ENST00000396082 GINM1Q9NU53 330 aa21.08■□□□□ 0.97
UPK3A-202ENST00000396082 LRRFIP1Q32MZ4 808 aaKnown RBP21.07■□□□□ 0.96
UPK3A-202ENST00000396082 GPAT2Q6NUI2 795 aa21.07■□□□□ 0.96
UPK3A-202ENST00000396082 OTOP1Q7RTM1 612 aa21.07■□□□□ 0.96
UPK3A-202ENST00000396082 AMOTL1Q8IY63 956 aa21.07■□□□□ 0.96
UPK3A-202ENST00000396082 EFCC1Q9HA90 598 aa21.07■□□□□ 0.96
UPK3A-202ENST00000396082 CPA4Q9UI42 421 aa21.07■□□□□ 0.96
UPK3A-202ENST00000396082 ZBTB21Q9ULJ3 1066 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms