RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 ARMCX6Q7L4S7 300 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 CYFIP1Q7L576 1253 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 FBXO33Q7Z6M2 555 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 NETO1Q8TDF5 533 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 FAM161BQ96MY7 647 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 PRDM10Q9NQV6 1147 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 PARP2Q9UGN5 583 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 PCDHB5Q9Y5E4 795 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 CTSHP09668 335 aa6.27□□□□□ -1.41
TRAV40-201ENST00000390467 ITIH2P19823 946 aa6.27□□□□□ -1.41
TRAV40-201ENST00000390467 TAGLNQ01995 201 aaKnown RBP6.27□□□□□ -1.41
TRAV40-201ENST00000390467 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
TRAV40-201ENST00000390467 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
TRAV40-201ENST00000390467 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
TRAV40-201ENST00000390467 LIG3P49916 1009 aa6.26□□□□□ -1.41
TRAV40-201ENST00000390467 DAB2P98082 770 aa6.26□□□□□ -1.41
TRAV40-201ENST00000390467 NKG7Q16617 165 aa6.26□□□□□ -1.41
TRAV40-201ENST00000390467 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
TRAV40-201ENST00000390467 PAX4O43316 350 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 EOMESO95936 686 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 CD8BP10966 210 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
TRAV40-201ENST00000390467 PSMD2Q13200 908 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 SLBPQ14493 270 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAV40-201ENST00000390467 IFI16Q16666 785 aaKnown RBP6.25□□□□□ -1.41
TRAV40-201ENST00000390467 AGMOQ6ZNB7 445 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 STK11IPQ8N1F8 1099 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 AGBL5Q8NDL9 886 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 MISP3Q96FF7 219 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 FMNL2Q96PY5 1086 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 TNKS2Q9H2K2 1166 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 MKNK2Q9HBH9 465 aa6.25□□□□□ -1.41
TRAV40-201ENST00000390467 SLITRK5O94991 958 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 ITGB5P18084 799 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 TFE3P19532 575 aaPredicted RBP6.24□□□□□ -1.41
TRAV40-201ENST00000390467 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 ARHGAP27Q6ZUM4 889 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 CDC37L1Q7L3B6 337 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 HDXQ7Z353 690 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 ZNF507Q8TCN5 953 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 WNT10AQ9GZT5 417 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 CNTNAP4Q9C0A0 1308 aa6.24□□□□□ -1.41
TRAV40-201ENST00000390467 F6X3S4 739 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 LRIG2O94898 1065 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 FUT4P22083 530 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 FGD1P98174 961 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 PRKCQQ04759 706 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 AOC3Q16853 763 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 TMC4Q7Z404 712 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 KCT2Q8NC54 265 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 TLR6Q9Y2C9 796 aa6.23□□□□□ -1.41
TRAV40-201ENST00000390467 PRR33A8MZF0 331 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAV40-201ENST00000390467 GFRA2O00451 464 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 GRK4P32298 578 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 ETF1P62495 437 aaKnown RBP6.22□□□□□ -1.41
TRAV40-201ENST00000390467 NKPD1Q17RQ9 610 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 PHC3Q8NDX5 983 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 GTF2IRD1Q9UHL9 959 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 SNCAIPQ9Y6H5 919 aa6.22□□□□□ -1.41
TRAV40-201ENST00000390467 TMEM265A0A087WTH1 108 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 PAPLNO95428 1278 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 CAP2P40123 477 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
TRAV40-201ENST00000390467 PRAMEF13Q5VWM6 474 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 MIPEPQ99797 713 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
TRAV40-201ENST00000390467 FOXQ1Q9C009 403 aa6.21□□□□□ -1.42
TRAV40-201ENST00000390467 GZF1Q9H116 711 aaPredicted RBP6.21□□□□□ -1.42
TRAV40-201ENST00000390467 PRDM5Q9NQX1 630 aaPredicted RBP6.21□□□□□ -1.42
TRAV40-201ENST00000390467 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.42
TRAV40-201ENST00000390467 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
TRAV40-201ENST00000390467 LMNB1P20700 586 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 XPCQ01831 940 aaPredicted RBP6.2□□□□□ -1.42
TRAV40-201ENST00000390467 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
TRAV40-201ENST00000390467 KRTAP1-3Q8IUG1 177 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 RIN3Q8TB24 985 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 XAGE3Q8WTP9 111 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 CRELD1Q96HD1 420 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 NOC4LQ9BVI4 516 aaKnown RBP6.2□□□□□ -1.42
TRAV40-201ENST00000390467 MIR1-1HGQ9H1L0 117 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 TJP2Q9UDY2 1190 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
TRAV40-201ENST00000390467 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
TRAV40-201ENST00000390467 CCDC27Q2M243 656 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 HID1Q8IV36 788 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 RC3H2Q9HBD1 1191 aaKnown RBP6.19□□□□□ -1.42
TRAV40-201ENST00000390467 PRDM7Q9NQW5 492 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 PITPNM2Q9BZ72 1349 aa6.19□□□□□ -1.42
TRAV40-201ENST00000390467 GNAT3A8MTJ3 354 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 ANGEL2Q5VTE6 544 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms