RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 POLR3DP05423 398 aaPredicted RBP14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 SLC44A5Q8NCS7 719 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 DDX4Q9NQI0 724 aaKnown RBP14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 FER1L6Q2WGJ9 1857 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 PSME4Q14997 1843 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 NMT2O60551 498 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 BAG4O95429 457 aaKnown RBP14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 APOA5Q6Q788 366 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 CERS3Q8IU89 383 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 TCHHQ07283 1943 aa14.31□□□□□ -0.12
SPTBN1-203ENST00000389980 PTPDC1A2A3K4 754 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 PSMD14O00487 310 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 WDHD1O75717 1129 aaPredicted RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 CACNB3P54284 484 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 FKBP1AP62942 108 aaKnown RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 WTAPQ15007 396 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 DDX60LQ5H9U9 1706 aaKnown RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 TNKSO95271 1327 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 NFKBIEO00221 500 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 ORC4O43929 436 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 IARSP41252 1262 aaKnown RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 LIFRP42702 1097 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 FOSBP53539 338 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 PDE4BQ07343 736 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 GBP4Q96PP9 640 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 TAOK3Q9H2K8 898 aa14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
SPTBN1-203ENST00000389980 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ERICH2A1L162 156 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 NFIAQ12857 509 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 SEC23AQ15436 765 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ZDHHC15Q96MV8 337 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 ZBTB43O43298 467 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 CDC27P30260 824 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 CDC37L1Q7L3B6 337 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 LLPHQ9BRT6 129 aaKnown RBP14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
SPTBN1-203ENST00000389980 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
SPTBN1-203ENST00000389980 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
SPTBN1-203ENST00000389980 MKNK2Q9HBH9 465 aa14.28□□□□□ -0.12
SPTBN1-203ENST00000389980 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 TSPY2A6NKD2 308 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 RASSF7Q02833 373 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 RSBN1LQ6PCB5 846 aaPredicted RBP14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 IQCA1Q86XH1 822 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.12
SPTBN1-203ENST00000389980 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 CPLX1O14810 134 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 SLURP2P0DP57 97 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 TFAP4Q01664 338 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 CFAP100Q494V2 611 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 ILDR2Q71H61 639 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 SPON1Q9HCB6 807 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
SPTBN1-203ENST00000389980 F13A1P00488 732 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 CDK8P49336 464 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 CXCL9Q07325 125 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 TCP10Q12799 353 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 MRIQ9BWK5 157 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 RASA1P20936 1047 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 PDCP20941 246 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 PRELPP51888 382 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
SPTBN1-203ENST00000389980 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms