RNA–Protein interactions for RNA: ENST00000379235.5

UBAP2-203, Transcript of ubiquitin associated protein 2, humanhuman

TSL 1 (best)

Gene UBAP2, Length 2,673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-203ENST00000379235 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
UBAP2-203ENST00000379235 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 ATG9AQ7Z3C6 839 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 CTAGE4Q8IX94 777 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 NOA1Q8NC60 698 aaKnown RBP12.78□□□□□ -0.36
UBAP2-203ENST00000379235 NEUROD6Q96NK8 337 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 NCAPGQ9BPX3 1015 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 RNF40O75150 1001 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 PRPF6O94906 941 aaKnown RBP12.78□□□□□ -0.36
UBAP2-203ENST00000379235 PBX1P40424 430 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 CASP7P55210 303 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
UBAP2-203ENST00000379235 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
UBAP2-203ENST00000379235 MFAP3LO75121 409 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.36
UBAP2-203ENST00000379235 FECHP22830 423 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 IGSF22Q8N9C0 903 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 CDC5LQ99459 802 aaKnown RBP12.77□□□□□ -0.36
UBAP2-203ENST00000379235 NAPGQ99747 312 aaPredicted RBP12.77□□□□□ -0.36
UBAP2-203ENST00000379235 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 GPR108Q9NPR9 543 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 WDR19Q8NEZ3 1342 aa12.77□□□□□ -0.36
UBAP2-203ENST00000379235 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 PLCD1P51178 756 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 TIMM10P62072 90 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 SPECC1Q5M775 1068 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
UBAP2-203ENST00000379235 NCOA7Q8NI08 942 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.37
UBAP2-203ENST00000379235 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
UBAP2-203ENST00000379235 ABL1P00519 1130 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 FGAP02671 866 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
UBAP2-203ENST00000379235 AMPD2Q01433 879 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 TRIML1Q8N9V2 468 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 AFAP1L1Q8TED9 768 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 MYCBPQ99417 103 aaPredicted RBP12.76□□□□□ -0.37
UBAP2-203ENST00000379235 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
UBAP2-203ENST00000379235 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
UBAP2-203ENST00000379235 PHRF1Q9P1Y6 1649 aaKnown RBP12.76□□□□□ -0.37
UBAP2-203ENST00000379235 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
UBAP2-203ENST00000379235 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ERCC5P28715 1186 aaPredicted RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ARHGAP25P42331 645 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 GRIN1Q05586 938 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 DNAJC21Q5F1R6 531 aaKnown RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 GRAMD1CQ8IYS0 662 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ACRBPQ8NEB7 543 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 SLIT3O75094 1523 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 A0A087WZG4 1122 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 PHKBQ93100 1093 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ADD3Q9UEY8 706 aaKnown RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 A0A087WUV0 522 aaPredicted RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 CDKL5O76039 1030 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 DEF6Q9H4E7 631 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
UBAP2-203ENST00000379235 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
UBAP2-203ENST00000379235 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 POLR2DO15514 142 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 GYPCP04921 128 aa12.74□□□□□ -0.37
UBAP2-203ENST00000379235 CASP14P31944 242 aa12.74□□□□□ -0.37
UBAP2-203ENST00000379235 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 FOXO4P98177 505 aa12.74□□□□□ -0.37
UBAP2-203ENST00000379235 SART3Q15020 963 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
UBAP2-203ENST00000379235 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
UBAP2-203ENST00000379235 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
UBAP2-203ENST00000379235 MYO1AQ9UBC5 1043 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms