RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 GPR101Q96P66 508 aaPredicted RBP16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 GOLGA6L1Q8N7Z2 621 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
SHROOM1-203ENST00000378679 ITPK1Q13572 414 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 DIXDC1Q155Q3 683 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 SPECC1Q5M775 1068 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 PLIN2Q99541 437 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 RIPOR2Q9Y4F9 1068 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 CAGE1Q8TC20 777 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 TSG101Q99816 390 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 ZKSCAN5Q9Y2L8 839 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 MTIF2P46199 727 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-203ENST00000378679 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 V9GYY5 206 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 SLC1A4P43007 532 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 UBASH3AP57075 661 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 FKBP15Q5T1M5 1219 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 IQUBQ8NA54 791 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 DLGAP5Q15398 846 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 KCNH3Q9ULD8 1083 aa16.14■□□□□ 0.17
SHROOM1-203ENST00000378679 CYP2D7A0A087X1C5 515 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 N4BP3O15049 544 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 TRIM47Q96LD4 638 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 KIF20AO95235 890 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 ASIC1P78348 528 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 SYCP1Q15431 976 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 NSUN7Q8NE18 718 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 LUC7LQ9NQ29 371 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 EXOC1Q9NV70 894 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 RMND1Q9NWS8 449 aa16.13■□□□□ 0.17
SHROOM1-203ENST00000378679 ELP1O95163 1332 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ZMYM6O95789 1325 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 BTBD18B2RXH4 712 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 NFIXQ14938 502 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 BARGINQ6ZT62 677 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 PPP1R12BO60237 982 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 STX17P56962 302 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 GSDMDP57764 484 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ZNF445P59923 1031 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 DBNDD1Q9H9R9 158 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 PXDNQ92626 1479 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 MYOM1P52179 1685 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 CHGBP05060 677 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 PRDX5P30044 214 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ERMNQ8TAM6 284 aa16.12■□□□□ 0.17
SHROOM1-203ENST00000378679 ADRA2BP18089 450 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 LIG1P18858 919 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 MECOMQ03112 1051 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 POLR2DO15514 142 aaKnown RBP16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 YEATS4O95619 227 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 CSF1RP07333 972 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 ZFYVE27Q5T4F4 411 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 KIF2CQ99661 725 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 CLSTN2Q9H4D0 955 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 DYNC1I1O14576 645 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 ZNF202O95125 648 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 CACNA2D4Q7Z3S7 1137 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 ZNF397Q8NF99 534 aaPredicted RBP16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
SHROOM1-203ENST00000378679 UTYO14607 1347 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms