RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 LRRD1A4D1F6 860 aa16.62■□□□□ 0.25
EXT1-201ENST00000378204 SPOPO43791 374 aa16.62■□□□□ 0.25
EXT1-201ENST00000378204 EVCP57679 992 aa16.62■□□□□ 0.25
EXT1-201ENST00000378204 NEDD9Q14511 834 aa16.62■□□□□ 0.25
EXT1-201ENST00000378204 SEC62Q99442 399 aaKnown RBP16.62■□□□□ 0.25
EXT1-201ENST00000378204 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 22
EXT1-201ENST00000378204 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.259e-7■■□□□ 11.7
EXT1-201ENST00000378204 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
EXT1-201ENST00000378204 CCNT1O60563 726 aaKnown RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 CEP85LQ5SZL2 805 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
EXT1-201ENST00000378204 TAF12Q16514 161 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 ANO1Q5XXA6 986 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 NAPGQ99747 312 aaPredicted RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 PDE4DQ08499 809 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 TBC1D31Q96DN5 1066 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 BIRC3Q13489 604 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
EXT1-201ENST00000378204 TEX11Q8IYF3 940 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 UBL4BQ8N7F7 174 aa16.61■□□□□ 0.25
EXT1-201ENST00000378204 MAP3K7CLP57077 242 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 TEX14Q8IWB6 1497 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 KIFC2Q96AC6 838 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 LARSQ9P2J5 1176 aaKnown RBP16.6■□□□□ 0.25
EXT1-201ENST00000378204 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
EXT1-201ENST00000378204 PRR16Q569H4 304 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 TEX2Q8IWB9 1127 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 CCDC117Q8IWD4 279 aaPredicted RBP16.6■□□□□ 0.25
EXT1-201ENST00000378204 USP6NLQ92738 828 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 SMIM24O75264 130 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 B4E1Z4 1266 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 VPS16Q9H269 839 aa16.6■□□□□ 0.25
EXT1-201ENST00000378204 TPD52P55327 224 aaPredicted RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 TPX2Q9ULW0 747 aaKnown RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 E7EVH7 732 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 IMPACTQ9P2X3 320 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 SYNRGQ9UMZ2 1314 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 CLUL1Q15846 466 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 MORC4Q8TE76 937 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 SP4Q02446 784 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 APPBP2Q92624 585 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 DNAJC8O75937 253 aaPredicted RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 C8orf74Q6P047 294 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 BABAM1Q9NWV8 329 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 CUTAO60888 179 aa16.59■□□□□ 0.25
EXT1-201ENST00000378204 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 GABPB2Q8TAK5 448 aaPredicted RBP16.59■□□□□ 0.25
EXT1-201ENST00000378204 AOX1Q06278 1338 aa16.58■□□□□ 0.25
EXT1-201ENST00000378204 CSGALNACT2Q8N6G5 542 aa16.58■□□□□ 0.25
EXT1-201ENST00000378204 SLC27A2O14975 620 aa16.58■□□□□ 0.25
EXT1-201ENST00000378204 MLKLQ8NB16 471 aa16.58■□□□□ 0.25
EXT1-201ENST00000378204 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.25
EXT1-201ENST00000378204 ERCC3P19447 782 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 IFT20Q8IY31 132 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
EXT1-201ENST00000378204 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
EXT1-201ENST00000378204 FAF1Q9UNN5 650 aaPredicted RBP16.58■□□□□ 0.24
EXT1-201ENST00000378204 GCP02774 474 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 TIMM10P62072 90 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 ERCC6LQ2NKX8 1250 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 EYA1Q99502 592 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 COG7P83436 770 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 SLC9C1Q4G0N8 1177 aa16.58■□□□□ 0.24
EXT1-201ENST00000378204 ARHGAP24Q8N264 748 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 GPCPD1Q9NPB8 672 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 GEN1Q17RS7 908 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 NOX5Q96PH1 765 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 FAM204AQ9H8W3 233 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 EYA2O00167 538 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 UAP1Q16222 522 aaPredicted RBP16.57■□□□□ 0.24
EXT1-201ENST00000378204 PLBD2Q8NHP8 589 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 ZBTB7BO15156 539 aaPredicted RBP16.57■□□□□ 0.24
EXT1-201ENST00000378204 ASIC2Q16515 512 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 IP6K1Q92551 441 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
EXT1-201ENST00000378204 PAK1Q13153 545 aa16.57■□□□□ 0.24
EXT1-201ENST00000378204 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
EXT1-201ENST00000378204 CCT6BQ92526 530 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms