RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 PLEKHA4Q9H4M7 779 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 NHSL1Q5SYE7 1610 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
FXN-201ENST00000377270 CRYMQ14894 314 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.68■□□□□ 0.42
FXN-201ENST00000377270 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
FXN-201ENST00000377270 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
FXN-201ENST00000377270 MICAL1Q8TDZ2 1067 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
FXN-201ENST00000377270 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
FXN-201ENST00000377270 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 M0R2C6 588 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 EXOC5O00471 708 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 UBXN4Q92575 508 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 SCAND2PQ9GZW5 306 aaPredicted RBP17.67■□□□□ 0.42
FXN-201ENST00000377270 VPS18Q9P253 973 aa17.67■□□□□ 0.42
FXN-201ENST00000377270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
FXN-201ENST00000377270 SNX1Q13596 522 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 IQCB1Q15051 598 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 E7EWF7 191 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 RTN2O75298 545 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 SCARF1Q14162 830 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
FXN-201ENST00000377270 SNUPNO95149 360 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 RBBP5Q15291 538 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 LRRFIP1Q32MZ4 808 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 CC2D1AQ6P1N0 951 aaPredicted RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 TTLL11Q8NHH1 800 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 BCL9O00512 1426 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 ITGA6P23229 1130 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
FXN-201ENST00000377270 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 GREM2Q9H772 168 aa17.65■□□□□ 0.42
FXN-201ENST00000377270 ZAP70P43403 619 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 EXOSC10Q01780 885 aaKnown RBP17.64■□□□□ 0.41
FXN-201ENST00000377270 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
FXN-201ENST00000377270 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 ITGB4P16144 1822 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 NR1I2O75469 434 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 KIF9Q9HAQ2 790 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 RIPOR2Q9Y4F9 1068 aa17.64■□□□□ 0.41
FXN-201ENST00000377270 H3BQV1 296 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 IRS4O14654 1257 aaPredicted RBP17.63■□□□□ 0.41
FXN-201ENST00000377270 CCP110O43303 1012 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 PFKFB2O60825 505 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 TUBB4AP04350 444 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 GCKP35557 465 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 ICA1Q05084 483 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 TSPAN18Q96SJ8 248 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 ODF2LQ9ULJ1 636 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 DISP2A7MBM2 1401 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 CTSWP56202 376 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 GSDMDP57764 484 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 SLC5A9Q2M3M2 681 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
FXN-201ENST00000377270 EIF3JO75822 258 aaKnown RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 ZFYP08048 801 aaPredicted RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 RDXP35241 583 aaKnown RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 FAM107BQ9H098 131 aa17.62■□□□□ 0.41
FXN-201ENST00000377270 DHX8Q14562 1220 aaKnown RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 E4F1Q66K89 784 aaPredicted RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 LEO1Q8WVC0 666 aaPredicted RBP17.62■□□□□ 0.41
FXN-201ENST00000377270 PPP1R13BQ96KQ4 1090 aa17.62■□□□□ 0.41
FXN-201ENST00000377270 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 DZIP3Q86Y13 1208 aaKnown RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 LLPHQ9BRT6 129 aaKnown RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 SKAP2O75563 359 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 NEFHP12036 1026 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 KCNA4P22459 653 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 PDCD2Q16342 344 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 C11orf57Q6ZUT1 292 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 DRAXINQ8NBI3 349 aaPredicted RBP17.61■□□□□ 0.41
FXN-201ENST00000377270 SMARCC2Q8TAQ2 1214 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 BICD2Q8TD16 824 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 MAF1Q9H063 256 aa17.61■□□□□ 0.41
FXN-201ENST00000377270 A0A0G2JS52 829 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 FRMD3A2A2Y4 597 aa17.6■□□□□ 0.41
FXN-201ENST00000377270 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms