RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SARSP49591 514 aaKnown RBP18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NTRK3Q16288 839 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NBPF14Q5TI25 921 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NBPF10Q6P3W6 841 aaKnown RBP18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NLRP2Q9NX02 1062 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 HOOK1Q9UJC3 728 aaKnown RBP18.84■□□□□ 0.61
TRIM39-201ENST00000376656 UBN2Q6ZU65 1347 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 USP5P45974 858 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 MSANTD4Q8NCY6 345 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 PANX2Q96RD6 677 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 A0A1B0GTH6 734 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 CIAO1O76071 339 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 RBL2Q08999 1139 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 NT5DC1Q5TFE4 455 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 CPLX2Q6PUV4 134 aaKnown RBP18.84■□□□□ 0.61
TRIM39-201ENST00000376656 CEP112Q8N8E3 955 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 L1RE1Q9UN81 338 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 KIF5CO60282 957 aa18.83■□□□□ 0.61
TRIM39-201ENST00000376656 TOB1P50616 345 aaPredicted RBP18.83■□□□□ 0.61
TRIM39-201ENST00000376656 FOXR1Q6PIV2 292 aa18.83■□□□□ 0.61
TRIM39-201ENST00000376656 B4E1Z4 1266 aa18.83■□□□□ 0.6
TRIM39-201ENST00000376656 RHOXF2BP0C7M4 288 aa18.83■□□□□ 0.6
TRIM39-201ENST00000376656 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
TRIM39-201ENST00000376656 LEKR1Q6ZMV7 388 aa18.83■□□□□ 0.6
TRIM39-201ENST00000376656 ELOA2Q8IYF1 753 aaPredicted RBP18.83■□□□□ 0.6
TRIM39-201ENST00000376656 RHOXF2Q9BQY4 288 aa18.83■□□□□ 0.6
TRIM39-201ENST00000376656 FAM217BQ9NTX9 383 aaPredicted RBP18.83■□□□□ 0.6
TRIM39-201ENST00000376656 DACH1Q9UI36 760 aa18.83■□□□□ 0.6
TRIM39-201ENST00000376656 BTBD18B2RXH4 712 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 FBXO2Q9UK22 296 aaPredicted RBP18.82■□□□□ 0.6
TRIM39-201ENST00000376656 ZBTB43O43298 467 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
TRIM39-201ENST00000376656 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 APTXQ7Z2E3 356 aaKnown RBP18.82■□□□□ 0.6
TRIM39-201ENST00000376656 SLC26A6Q9BXS9 759 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 TJP1Q07157 1748 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 GOLGA8AA7E2F4 631 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 NOSTRINQ8IVI9 506 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 IGSF22Q8N9C0 903 aa18.82■□□□□ 0.6
TRIM39-201ENST00000376656 VSNL1P62760 191 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 ABL1P00519 1130 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 PLCD1P51178 756 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 USP49Q70CQ1 688 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 SLC35F6Q8N357 371 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
TRIM39-201ENST00000376656 INCENPQ9NQS7 918 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 MEGF6O75095 1541 aa18.81■□□□□ 0.6
TRIM39-201ENST00000376656 POTEB2H3BUK9 544 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 PTPREP23469 700 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 PPFIBP1Q86W92 1011 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 CDC5LQ99459 802 aaKnown RBP18.8■□□□□ 0.6
TRIM39-201ENST00000376656 ERLIN1O75477 346 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 STX17P56962 302 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 KCNJ14Q9UNX9 436 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
TRIM39-201ENST00000376656 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
TRIM39-201ENST00000376656 CYP27B1O15528 508 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 ACTN4O43707 911 aaKnown RBP18.79■□□□□ 0.6
TRIM39-201ENST00000376656 APPP05067 770 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 KLHL10Q6JEL2 608 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 RASGRP2Q7LDG7 609 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 CTAGE9A4FU28 777 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 PHACTR2O75167 634 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 CASP8Q14790 479 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 TRIML1Q8N9V2 468 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 ACRBPQ8NEB7 543 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 NAA15Q9BXJ9 866 aaKnown RBP18.79■□□□□ 0.6
TRIM39-201ENST00000376656 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 MAP3K15Q6ZN16 1313 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 DIS3L2Q8IYB7 885 aaKnown RBP18.79■□□□□ 0.6
TRIM39-201ENST00000376656 PCDHB6Q9Y5E3 794 aa18.79■□□□□ 0.6
TRIM39-201ENST00000376656 MYH7P12883 1935 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 IVLP07476 585 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 PBX1P40424 430 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 NOP2P46087 812 aaKnown RBP18.78■□□□□ 0.6
TRIM39-201ENST00000376656 SSRP1Q08945 709 aaKnown RBP18.78■□□□□ 0.6
TRIM39-201ENST00000376656 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 MFAP3LO75121 409 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 CD44P16070 742 aaKnown RBP18.78■□□□□ 0.6
TRIM39-201ENST00000376656 ATP2B1P20020 1258 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 ERCC5P28715 1186 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-201ENST00000376656 CASP14P31944 242 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 CCDC102AQ96A19 550 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
TRIM39-201ENST00000376656 TMEM67Q5HYA8 995 aa18.77■□□□□ 0.6
TRIM39-201ENST00000376656 MSL3Q8N5Y2 521 aaKnown RBP18.77■□□□□ 0.6
TRIM39-201ENST00000376656 EFCC1Q9HA90 598 aa18.77■□□□□ 0.6
TRIM39-201ENST00000376656 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
TRIM39-201ENST00000376656 MMP1P03956 469 aa18.77■□□□□ 0.6
TRIM39-201ENST00000376656 CABP4P57796 275 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms