RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 APBB1IPQ7Z5R6 666 aaPredicted RBP7.44□□□□□ -1.22
CHD6-202ENST00000373222 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
CHD6-202ENST00000373222 MB21D2Q8IYB1 491 aaPredicted RBP7.44□□□□□ -1.22
CHD6-202ENST00000373222 ZBTB38Q8NAP3 1195 aaPredicted RBP7.44□□□□□ -1.22
CHD6-202ENST00000373222 KIAA1524Q8TCG1 905 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 TRIM5Q9C035 493 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 CHD4Q14839 1912 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 C4AP0C0L4 1744 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 C4BP0C0L5 1744 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 PCCAP05165 728 aaPredicted RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 CSF1RP07333 972 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 EGFLAMQ63HQ2 1017 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 SASS6Q6UVJ0 657 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 KIF6Q6ZMV9 814 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 PHKBQ93100 1093 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 MS4A4AQ96JQ5 239 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 SEC31BQ9NQW1 1179 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 CNNM1Q9NRU3 951 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 TRMT112Q9UI30 125 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 PCDHA7Q9UN72 937 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 MYH14Q7Z406 1995 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 MAP3K15Q6ZN16 1313 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 BIN1O00499 593 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 IRS4O14654 1257 aaPredicted RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 RRP9O43818 475 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 APPP05067 770 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 CYP19A1P11511 503 aaPredicted RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 OSBPP22059 807 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 NDUFA8P51970 172 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 KCNQ4P56696 695 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 PTPN21Q16825 1174 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 SPTY2D1Q68D10 685 aaPredicted RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 DRC7Q8IY82 874 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 VGLL2Q8N8G2 317 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 FSIP1Q8NA03 581 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 ENGASEQ8NFI3 743 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 ACSBG1Q96GR2 724 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 DDX19AQ9NUU7 478 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 RCOR1Q9UKL0 485 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 LHX6Q9UPM6 363 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
CHD6-202ENST00000373222 ANKRD36CQ5JPF3 1778 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 NEDD4P46934 1319 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 ZNF532Q9HCE3 1301 aa7.43□□□□□ -1.22
CHD6-202ENST00000373222 UTRNP46939 3433 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 B4E1Z4 1266 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 MARCKSP29966 332 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 CDC27P30260 824 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 ZNF75DP51815 510 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 CTSWP56202 376 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 CTDSPL2Q05D32 466 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 IQCB1Q15051 598 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 IMMTQ16891 758 aaKnown RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 CMTR1Q8N1G2 835 aaKnown RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 CACTINQ8WUQ7 758 aaKnown RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 MROH7-TTC4A0A0A0MT08 1334 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 TLDC2A0PJX2 215 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 USP27XA6NNY8 438 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 PRKAB2O43741 272 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 ERCC5P28715 1186 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 MICU3Q86XE3 530 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 PLA2G4DQ86XP0 818 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 APPBP2Q92624 585 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 SPACA7Q96KW9 195 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 C16orf45Q96MC5 204 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 ZKSCAN3Q9BRR0 538 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 LLPHQ9BRT6 129 aaKnown RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 ZSCAN16Q9H4T2 348 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 SPTLC3Q9NUV7 552 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 ORC3Q9UBD5 711 aaPredicted RBP7.42□□□□□ -1.22
CHD6-202ENST00000373222 CFAP45Q9UL16 551 aa7.42□□□□□ -1.22
CHD6-202ENST00000373222 KDM4FA0A1W2PPD8 638 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 ZNF213O14771 459 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 ADD2P35612 726 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 DHX40Q8IX18 779 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 TDRD7Q8NHU6 1098 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 ZNF274Q96GC6 653 aaPredicted RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 EPB41L4AQ9HCS5 686 aaPredicted RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 LRP6O75581 1613 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 BAZ2AQ9UIF9 1905 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 MYH2Q9UKX2 1941 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 WDHD1O75717 1129 aaPredicted RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 STARD3NLO95772 234 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 HMGN5P82970 282 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 TSNAXIP1Q2TAA8 658 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 ZSCAN25Q6NSZ9 544 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 SLC51AQ86UW1 340 aa7.41□□□□□ -1.22
CHD6-202ENST00000373222 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
CHD6-202ENST00000373222 AOPEPQ8N6M6 819 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms