RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 CAPN12Q6ZSI9 719 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 USH1CQ9Y6N9 552 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 PAK1Q13153 545 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 LLGL1Q15334 1064 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
PLXNA3-201ENST00000369682 SPOPO43791 374 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 KRT40Q6A162 431 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 BCORL1Q5H9F3 1711 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 RRAGAQ7L523 313 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 IQUBQ8NA54 791 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 PDE4DQ08499 809 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 NDUFA8P51970 172 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 ASIC2Q16515 512 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 FANCLQ9NW38 375 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 SETDB1Q15047 1291 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 PSMD6Q15008 389 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
PLXNA3-201ENST00000369682 DAAM2Q86T65 1068 aa12.9□□□□□ -0.35
PLXNA3-201ENST00000369682 VPS41P49754 854 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 KRT71Q3SY84 523 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 CIB2O75838 187 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 SMC6Q96SB8 1091 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 ZNF354CQ86Y25 554 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 SYNMO15061 1565 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 ADCK5Q3MIX3 580 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 STMN2Q93045 179 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 EIF4E1BA6NMX2 242 aaKnown RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 GPAA1O43292 621 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 RPSAP08865 295 aaKnown RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 HSPA1LP34931 641 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 EYA1Q99502 592 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 CLTAP09496 248 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 USTQ9Y2C2 406 aa12.89□□□□□ -0.35
PLXNA3-201ENST00000369682 TAF5LO75529 589 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 CUTAO60888 179 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 PYM1Q9BRP8 204 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 GKAP1Q5VSY0 366 aaPredicted RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 CCDC77Q9BR77 488 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 UTP11Q9Y3A2 253 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 MORC3Q14149 939 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 MIPOL1Q8TD10 442 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 GCKP35557 465 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 ACTN2P35609 894 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 NAA35Q5VZE5 725 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 CXCR5P32302 372 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 GBP1P32455 592 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 FBXO38Q6PIJ6 1188 aa12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 MTRF1LQ9UGC7 380 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
PLXNA3-201ENST00000369682 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms