RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 SPATA31E1Q6ZUB1 1445 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 CALUO43852 315 aaPredicted RBP11.08□□□□□ -0.64
SCAF11-202ENST00000369367 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 NT5C3AQ9H0P0 336 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 HEG1Q9ULI3 1381 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 AK2P54819 239 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 KCTD2Q14681 263 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 CIAPIN1Q6FI81 312 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
SCAF11-202ENST00000369367 ZMYM4Q5VZL5 1548 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 UBASH3AP57075 661 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 VWA3BQ502W6 1294 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 TMC6Q7Z403 805 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ZBTB1Q9Y2K1 713 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 CCDC169A6NNP5 214 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ZEB2O60315 1214 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 CFBP00751 764 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 PPARAQ07869 468 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 MARCKSP29966 332 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 KRT83P78385 493 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ICA1Q05084 483 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ZKSCAN3Q9BRR0 538 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 BIRC3Q13489 604 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 CKAP4Q07065 602 aaKnown RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 KIFC2Q96AC6 838 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 PAGR1Q9BTK6 254 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 MLXIPQ9HAP2 919 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 COPRSQ9NQ92 184 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 RASAL2Q9UJF2 1139 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 FOSP01100 380 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 TUBB4AP04350 444 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 KLHL40Q2TBA0 621 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ANKRD35Q8N283 1001 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 JPH2Q9BR39 696 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-202ENST00000369367 ELP1O95163 1332 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
SCAF11-202ENST00000369367 P4HA1P13674 534 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 YWHAEP62258 255 aaKnown RBP11.06□□□□□ -0.64
SCAF11-202ENST00000369367 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 ABCB5Q2M3G0 1257 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 SSH3Q8TE77 659 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 BTDP43251 543 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 GPATCH4Q5T3I0 446 aaKnown RBP11.06□□□□□ -0.64
SCAF11-202ENST00000369367 ARHGEF16Q5VV41 709 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 GLG1Q92896 1179 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 PRKAG2Q9UGJ0 569 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
SCAF11-202ENST00000369367 TMOD1P28289 359 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 EXOC8Q8IYI6 725 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 SLC27A2O14975 620 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-202ENST00000369367 CHST3Q7LGC8 479 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 RSPH3Q86UC2 560 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-202ENST00000369367 COA1Q9GZY4 146 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 RABGAP1Q9Y3P9 1069 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 CCDC14Q49A88 953 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
SCAF11-202ENST00000369367 SGSM2O43147 1006 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 MMP10P09238 476 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 SMC1AQ14683 1233 aaKnown RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 GAS8O95995 478 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 GRAPQ13588 217 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 CDK12Q9NYV4 1490 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 USP17L21D6R901 530 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 ZBTB8OSQ8IWT0 167 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 GABPB2Q8TAK5 448 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 KLHDC4Q8TBB5 520 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 CETN3O15182 167 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 PRDM1O75626 825 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 TNNT1P13805 278 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 GYG1P46976 350 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 CALCRLQ16602 461 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 TICAM2Q86XR7 235 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 TACC1O75410 805 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 FLOT1O75955 427 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 PDE4DQ08499 809 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 SPOUT1Q5T280 376 aaKnown RBP11.05□□□□□ -0.64
SCAF11-202ENST00000369367 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
SCAF11-202ENST00000369367 LRWD1Q9UFC0 647 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms